Shewanella psychrophila: Sps_01871
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Entry
Sps_01871 CDS
T05063
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
spsw
Shewanella psychrophila
Pathway
spsw01503
Cationic antimicrobial peptide (CAMP) resistance
spsw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sps_01871
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Sps_01871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_01871
Transporters [BR:
spsw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
Sps_01871
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AQS37034
UniProt:
A0A1S6HNF4
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Position
2101219..2102856
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AA seq
545 aa
AA seq
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MRVLLKRLSLYPTISCICVLLAGCGPKLVPPGIVYCSEGNPESFNPQLVTSGTTVDATSQ
QIYNGLVNYNLMSGQIEPSLAIHWQISDDELTYTFQLRKKVNFHHTQEFTPTRHFNADDV
LFSFNRVIDPSHPFHHISKTGYPFFQSIGFDKQIDSIEKLSEHEVAFHLKHKDASFLANL
ASGFAVILSAEYADTLVAKGEQEKIDRKPVGTGPFQLVKYVKNDYIRYHRNEGYWRQLPS
AELLVFDITPKSTTRLAKLITGDCSVSALPKAGELSVVFQHDELEVDSLPGFNVAFWAFN
TQKAPFNDVRVRKALAHAVDRNNILRAVYQKTAVESTGMLPPMSWAYSANQSLVDYDPEK
AKQLLKEAGIKNLTIDIWAMPVARIYNPNAHKTAELIQADLADIGVKVNIVSYDWSVFNQ
KLSQRSYDSVLIGWNADNSDPDNFFTPILSCASVLSNSNRSRWCNPEFDDILIKAKSITS
KKERKALYQEAEALFAQELPMLPLAHATRLILKKKGVDNSQLTPFGGISFNANHQRDMMS
TEEIR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgctgcttaagcgtctatctttatatcccaccatatcctgcatttgtgtttta
cttgcaggttgtggcccgaagctagtcccaccagggatagtctattgctccgaggggaat
cctgaatctttcaatcctcagctggtcacttcaggaacgactgtggatgcaacatcacag
cagatatacaatggactggtaaattacaacttaatgtccggccagatagaaccttcgtta
gcgatacactggcagatcagtgacgatgaattaacttacacctttcaattacgaaaaaaa
gttaactttcatcacacccaagagttcacgccaacccgtcatttcaatgctgacgatgtg
ttattctcattcaacagagtgatcgatccatctcaccctttccatcatatctccaaaaca
ggatacccgtttttccagagcataggcttcgataaacagatcgactcaattgaaaaactg
tctgaacatgaagtcgccttccaccttaaacataaagatgcctctttcctcgccaactta
gcttctgggtttgcagtcatcttgtctgccgaatatgctgacaccttagttgcaaaaggt
gagcaagagaaaattgaccgaaagcccgtcggcacaggaccttttcaactagttaagtat
gtcaagaatgactacatacgataccatcgtaatgagggttattggcgacagctgcccagc
gcagaattattagtgtttgatatcacgcctaaaagtaccaccagactggctaaactcatc
acaggtgattgcagtgtatcagccctaccaaaggccggagaactctcggtggtttttcag
catgatgagctcgaagtagattcactgccagggtttaatgttgctttttgggcgttcaat
actcaaaaagccccctttaatgatgtcagagtacgtaaagccttggcccacgcagtagac
agaaataatattctaagagcggtttaccagaagacggctgtcgaatccacaggcatgctc
cctcctatgtcttgggcatattctgcaaaccagagtcttgtagattatgatcccgagaaa
gccaaacaactattgaaagaagcaggcataaaaaatcttactatcgatatctgggccatg
cccgtcgcacgtatctacaaccctaacgctcataagacagcggaactcattcaggctgat
ttggcagatataggtgtaaaggttaatatcgttagctatgattggagtgtattcaaccag
aagctaagccaaaggagctatgactcggtgctgatcggttggaatgccgataacagcgat
cctgacaacttttttactcccatccttagctgcgcatcagtactgtccaacagtaatcgt
tcccgttggtgtaacccagaatttgatgacattcttattaaagcaaaatcaattacatca
aaaaaagaacgcaaagcactctatcaggaggctgaggctctatttgcacaagagctgcct
atgttacctcttgcccatgcgactcggcttattttgaagaaaaaaggggtagacaatagc
cagctcactccttttggtgggatttcctttaatgccaaccatcagagggatatgatgagt
actgaggagataagataa
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