Shewanella psychrophila: Sps_02086
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Entry
Sps_02086 CDS
T05063
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00280
Valine, leucine and isoleucine degradation
spsw00650
Butanoate metabolism
spsw00907
Pinene, camphor and geraniol degradation
spsw01100
Metabolic pathways
spsw01120
Microbial metabolism in diverse environments
spsw04146
Peroxisome
Module
spsw_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Sps_02086
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sps_02086
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Sps_02086
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sps_02086
Enzymes [BR:
spsw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Sps_02086
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AQS37246
UniProt:
A0A1S6HNZ7
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Position
2355987..2356877
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AA seq
296 aa
AA seq
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MFPKQVSIFEVGARDGLQNEKPVSTQDKIVLIQDLAKAGIKRIEAASFVSPKWVPQMADS
GEVLRNMKREADVIYSALTPNLKGLELALDAKADEVAIFGAASESFSQRNINCSIQESIA
RFVPLMERAKAENIRVRGYVSCVLGCPYEGEIAVSEVARVSEILYKMGCYEISLGDTIGV
GTPNNARKMVQAVSQVVPVAQLALHFHDTYGQALANILACLETGVSVVDSSVAGLGGCPY
AKGASGNLASEDLVYMLHGLGIETGIDIDLLAKAGNSISQALGRQTGSKVAQALIS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgttccctaaacaagtcagcatattcgaagtcggtgcccgtgacggcctgcaaaacgaa
aagcccgtcagtactcaggacaagatagtcttgatacaagacttagccaaagcaggaatt
aagcgcatcgaagcggcaagttttgtgtcacctaagtgggtgccacagatggccgattca
ggtgaagtcttgcgtaatatgaagcgtgaagcagatgttatctatagcgccctgacccca
aacctaaaaggtctggaactcgcacttgacgctaaagccgatgaagttgcgatctttggc
gcggcgtctgagagcttctctcagcgtaatataaactgttcgatccaagagtctatcgct
cgctttgtgccactgatggagcgggctaaggccgagaacattcgggttcgaggctatgtg
tcctgtgtcttgggttgcccctatgaaggtgagattgccgtgagcgaagtggcccgagtg
tctgaaatcctttacaagatgggctgctatgagatctcactcggtgacaccataggcgtt
ggcacaccaaataatgcccgtaaaatggtgcaagccgtcagccaagtcgtgccagttgct
caactcgcactgcactttcatgatacctacggccaagcactggcgaatattctggcctgc
cttgaaaccggcgtcagtgtcgtcgactcatcggtggcaggactcggtggatgtccctat
gccaaaggtgcatcgggtaacttagccagcgaagatctggtctacatgttacatggactc
ggtatagaaacaggtatagatattgatttactggcaaaggccggcaatagcataagtcag
gctcttggcagacagacaggctctaaagttgcccaagcgttgatcagttaa
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