Shewanella psychrophila: Sps_02124
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Entry
Sps_02124 CDS
T05063
Name
(GenBank) Beta-barrel assembly machine subunit BamA
KO
K07277
outer membrane protein insertion porin family
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spsw03029
]
Sps_02124
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_02124
Mitochondrial biogenesis [BR:
spsw03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
Sps_02124
Transporters [BR:
spsw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sps_02124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
AQS37283
UniProt:
A0A1S6HP32
LinkDB
All DBs
Position
complement(2399423..2401906)
Genome browser
AA seq
827 aa
AA seq
DB search
MRFNKLFASMVLVGASLSGNGWAETFQPFEVTDIQIQGLQRVALGAALLTIPVKVGDTVD
ELKLQQAIKSLYASTNFEHIEVSRDGGVLIVTVKERPTISSVTFEGNKDIKDEQLQESLD
GSGVKVGESLDRTMLAGIEKSLQDFYYGVGKYGAKVKAEVVNLPRNRVELQFNFTEGLAA
EIKQINVVGNEVFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETVKSFYHNRGY
IRFDVTSTQVAMTPDRKGLYITINVDEGEQYTVTEVNLTGDLMGREKVMKAILPIKVGDT
YNGADVTFAEEMYGKYLGRFGYAYPEVQTYPEIDDEAKEVSLNVNIKPGKRVYVRSINFS
GNQVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGYFETVDTETVQVPGTDDLVDIA
FNVKEQPSGSFNAGVGYGTESGMSLQFGVQQSNFLGTGNQAGINLNTNKYSKNVNLSFTD
PYFTKDGVSLGGSVYWNEFDAHEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNT
ISEISAYEQALRFYNIYRDDQDPNADLAFNNFEANLGWYRSTLNRGTFPSDGSSQRLSTK
ITIPGSDLQYFKADFDTSFYFPITRSHKWVVLAKARVGYGNGYGQFNNNDQILPFWENYY
SGGSSSLRGFKSNSVGPRSFYLSRGLEPCSPDPSGDGCYLPGDPNKIQVSSGNSIGGNAI
ATASFEMIVPTPFLDEAYTNSVRTSFFFDAGNVWDTEFDYDSYRYLPAHEFDKLQDYSDP
GRIRASAGMSIQWLSPMGPMVFSLAWPVKEYEDDETEIFSFNIGKTF
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagatttaataaactttttgcctcgatggtattagtcggtgcgtctttatcagggaac
ggttgggcagaaacattccagccatttgaagtcacagatatccaaattcaaggactacaa
cgtgtagctcttggtgctgccttactgactattccagtcaaggtaggtgatactgtcgat
gaacttaaacttcaacaagcgattaaaagcttgtatgcctcgacgaacttcgaacatatc
gaagtcagtcgtgatggcggtgttctgattgtcaccgtcaaagaacgaccaaccatcagt
tcggttactttcgaaggtaacaaggacatcaaagatgagcagcttcaagagagcttagac
ggctctggtgtgaaggtgggtgagtcgttagacagaaccatgctggccggtatcgaaaaa
agcctacaagacttctattatggtgttggaaagtacggtgctaaagtgaaagctgaagtc
gttaacttgccccgtaaccgtgtcgagttacaatttaattttaccgaaggtctagccgct
gaaatcaagcagattaatgttgtcggtaatgaagtcttcaccgatgctgaattgatcggt
atgttggaacttaaagattacgtcgcttggtgggatctgtttggtgaacgccgttatcag
aaacagaaacttcaggccgatctagaaacggtaaagagtttctatcataaccggggttat
attcgtttcgatgtgacttcgactcaggtcgccatgaccccagatcgcaaaggtttgtat
atcaccatcaatgtcgatgagggtgaacagtatacagtcacagaagtaaaccttaccggc
gacctgatgggtcgtgagaaggtgatgaaggccattctgcctatcaaggttggtgacact
tataatggtgccgacgtgacatttgccgaagagatgtacggcaagtatttaggtcgtttc
ggttacgcctacccagaagttcagacttaccctgaaattgacgatgaggcaaaagaagtg
agcctcaacgtcaatattaaaccgggtaaacgtgtctatgtgcgtagcattaatttttcc
ggtaaccaagtgactaaagatgaggtcatgcgccgtgagttgcgtcagatggaaggtgct
tggcttaattcggctcaagtcgagcaatcaaaggcacgtttgaatcgtcttggttacttt
gaaactgtcgataccgaaactgtacaggttcctggcaccgatgatctggtcgacatagcg
ttcaacgtgaaagagcagccctctggttcgtttaatgccggtgttggttatggtactgag
tcaggtatgagtctgcagttcggtgtgcagcagagtaacttcttaggtacgggtaatcag
gcgggtatcaatcttaataccaacaagtattctaagaatgtgaatttgtcgtttaccgac
ccatactttaccaaagatggtgtcagcttaggcggcagcgtttattggaacgagtttgat
gcacatgaagctaatcttgagcgatataagaacagctcctatggtgttgcacttaactcc
ggattccctatcaacgaatataaccgtatcaacggtggtataggttaccgtcataacact
atttcagagatttcggcctatgagcaggcacttagattctataacatctaccgagatgac
caagatcctaatgccgacttagcgtttaataacttcgaggctaacttaggctggtatcgc
agtacattgaaccgaggcacattcccatcggatggttcatctcagcgtttaagtactaag
ataacgataccgggctcagatctgcagtatttcaaggcagattttgataccagtttctat
ttcccaatcactcgcagtcacaagtgggtagtattagcgaaagctcgtgttggctatggt
aatggttatgggcaatttaataataacgaccagatcttgcctttctgggaaaactattat
tctgggggcagcagttcactccgcggttttaagtctaattcggtgggtccgcgttcattc
tacttgagtcgtggtttagagccttgttctccagatccatcgggggacggatgttatctg
ccaggtgatccaaataagatccaggtgagttctggtaactctatcggtggtaatgcgatt
gcaactgccagttttgaaatgattgtgcctacacctttcttggatgaggcttacactaac
tcggtacgtaccagcttcttcttcgatgcgggtaacgtgtgggatactgagtttgattat
gattcttatagataccttccggctcatgaatttgataaacttcaagattactctgatcca
ggtaggattcgagcctctgcgggtatgagtattcaatggttatctcctatgggacctatg
gtatttagcttggcgtggcctgttaaggaatacgaggatgatgaaactgaaatcttctcg
tttaacattggtaaaactttctag
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