Shewanella psychrophila: Sps_02171
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Entry
Sps_02171 CDS
T05063
Name
(GenBank) hypothetical protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00540
Lipopolysaccharide biosynthesis
spsw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Sps_02171
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spsw01005
]
Sps_02171
Lipopolysaccharide biosynthesis proteins [BR:
spsw01005
]
Lipid A
Sps_02171
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
AQS37329
UniProt:
A0A1S6HPA2
LinkDB
All DBs
Position
complement(2446282..2447310)
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AA seq
342 aa
AA seq
DB search
MLKYIIAISLTLPFFILTDANAADVLSPSSSWGQFTFENDAFGVLEPSDDGYTNGVAYSW
GEAQVNSFEDVNIPAWLHYISDWTYINRGEDGSYTVSYSIQQGMYTPTNLEEESLIVDDR
PYAGVLIWQAKLRQFDKNVATSLIIDVGVVGPAALAEPTQTAIHSVISATMANGWDNQIN
NEPVFRVGSEYVKRLADFPLSDSIVSDLNFYAQAGIGNLRSDVSMALIFRLGSGLDETFS
LVSPTASHSANPYTLVSGHGFYWQVFMSLHGRYVLNDITLNGNTFEDSHSVDLIHEQNQF
SLGFAMRWESWGVLFSTLRGSKQFDDQQDDTNFAAVSISYFY
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaatatatcattgctatatcactcacactgccattttttattttaactgatgcc
aatgccgctgatgtactttccccctcctcaagttgggggcaattcacttttgaaaatgat
gcttttggcgtacttgagcccagtgacgacggttacactaacggtgttgcctattcttgg
ggagaagcccaagttaacagcttcgaggacgttaacattccagcttggttgcattatatc
agtgactggacttacatcaatcgaggtgaggatgggagttacactgtaagttattcgatc
caacaaggcatgtatacgcctacaaacttggaagaggagtcattgattgttgatgatagg
ccatatgcaggggtcttaatatggcaagctaaattgcgccagtttgataaaaatgttgca
acaagtctaattatcgatgtaggcgttgtgggaccagcagctctggctgagccaacacaa
acagctattcacagtgttatttcggcgacaatggcaaatggttgggacaatcaaattaac
aatgaaccagtatttcgagtcgggtctgaatatgtaaagcggttagcagattttccactg
tcagatagtattgtcagtgatcttaatttctatgctcaagctggtatcggcaaccttaga
agcgatgtcagtatggcattaatttttagactcgggagcggactggatgagaccttttct
ctagtgagtccaaccgcttcccatagtgctaacccctatacgttagtatctggtcatggt
ttttactggcaggtatttatgtcattgcatggccgttatgtcttaaacgatattacctta
aacggtaatactttcgaagatagtcattctgtcgacttaattcatgagcagaatcaattt
agcttaggctttgctatgcgctgggagagctggggagtattgttttcgacattacgtgga
agcaaacaatttgatgatcaacaagatgatactaactttgccgccgtaagtatcagctac
ttctattaa
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