Shewanella psychrophila: Sps_02239
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Entry
Sps_02239 CDS
T05063
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_02239
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sps_02239
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
Thioredoxin_9
Motif
Other DBs
NCBI-ProteinID:
AQS37397
UniProt:
A0A1S6HPF5
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All DBs
Position
complement(2543529..2544440)
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AA seq
303 aa
AA seq
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MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLSLKLFRRKNRSL
LLTEEGQGYFLDIKDIFVQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLAKFSENN
PDIDVRIKAVDDDNDALSDDVDVAIFYGQGNWAGLRADKLKNEVLIPVCSPLLLNGPKPL
DKPSDLKNHTLLHDTNRHDWQAWFRQCGINDINVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFPEVLVSKNAYYLVCQQNHAEIGKIAAFREWMLDMFEEESRSEL
LPG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacgcttacctccattgaacgcggtaaaagcatttgaggccgcagctaggcat
ctcagctttactcgcgccgccgaagaattgtttgtgacccaggctgctgtgagtcatcaa
attaaggctttagaagagtttctaagcttaaaattgtttcgccgaaagaaccgttcttta
ctgttaactgaagaaggtcagggctattttctcgatattaaagatatcttcgtccaactt
gcagacgcgaccgatagattattggcaagaagtgccataggctcactcacagtgagtatg
tcaccgagttttgccattcaatggttagtgccaagattggccaagtttagtgagaataat
cccgatattgatgtcaggataaaggccgtcgatgatgacaatgatgcgctttctgatgat
gtcgatgttgctatcttttatggccaggggaactgggctggattacgcgccgataagctt
aaaaatgaagtcttaattcctgtttgctcacctcttttattaaatggacctaagccacta
gataagcctagtgatcttaaaaatcataccttactacatgatacgaaccgccatgattgg
caagcttggtttagacaatgtgggattaatgatattaatgtgaaccaagggccgatattt
agtcattcttccttggtcttgcaagctgcagctcatggacaaggagtggccttagggtac
agcgtactggctcgtcccgatattaaggcgggcaggttagtgtgtcctttccctgaagtt
ttagtcagtaaaaacgcatattatttagtttgccagcaaaaccatgcagagattggcaag
atagcggcatttcgtgagtggatgttagatatgtttgaagaggagtcccgcagtgaattg
ctcccaggttaa
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