Shewanella psychrophila: Sps_02254
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Entry
Sps_02254 CDS
T05063
Name
(GenBank) DNA-binding protein with winged-HTH domain
KO
K03765
transcriptional activator of cad operon
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_02254
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Other transcription factors
Others
Sps_02254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trans_reg_C
Caprin-1_C
Motif
Other DBs
NCBI-ProteinID:
AQS37412
UniProt:
A0A1S6HPI7
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All DBs
Position
2561121..2562647
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AA seq
508 aa
AA seq
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MSDIQSLFTSPQPFQIGDSIFVDPIKHTIRLETEQKVEPQLVQLLTLLASEQGQTVSREA
IFTHIWPDMVVTANSLNQSMSKLRKLLGDDSKNPHIIVTIPRQGYALIEKVTLVHSANTS
KNEDKPVSIETSKVEQQTSDSPSSSVMSHSQHQTQVAKESLATGVNSKPSPFKNKNAIAL
LSGLLILLCLSLITTLLWLEDRTQVVVSVESVLTNNGQIPADPISHILAAFLYTGLKESL
KNDPFDIHFICPEKPFEMCEQDFSYIPDEVIEVKPIIRYSPKSLQVKVLIDGEQNSFEFQ
SYKLSFDRLDEEFDELLLNLVEKFTDDNNRKRVISSLFEWLKRPNDPSLSIDRIKLSAYG
YSQQVLNEPFVIDLLKQSAQQCDADCPIIYGSFGRVMLNQYLKTDKLDDLQQAIHFLLQG
SPEYLPDTRLKLAAAYALSGEREKSHQLLKEVDKVSFIAVKKALHYYLDITHLNKASTAP
FHSHKNYLATQLVSRAEQEKSKVLIRLE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagatattcaaagcctttttacttctccacagccttttcaaataggcgactccatt
tttgttgatccgattaagcacacgatcaggttggagacggaacaaaaagttgaacctcaa
ctggtgcaattactcaccttgttagccagtgaacaagggcaaaccgtcagcagagaagcc
atattcactcacatttggcccgatatggtcgtcaccgcaaactcgcttaatcaatctatg
agtaagttgcgtaagctattaggcgatgacagtaagaatccgcacatcatagtcactatc
ccacgccaagggtacgcactgatagagaaagtcactctagtgcattcggctaacacaagt
aaaaatgaagataagcctgtttcgattgagactagcaaagttgaacagcagacaagtgat
agcccctcttcaagtgttatgtcacattcacagcatcaaacacaagttgcaaaggaatca
cttgctacaggtgttaactctaagccttcacctttcaagaacaagaacgcaattgcactg
ctaagcggcttattgatattgctatgcctttcactgataacaacactactttggctagaa
gaccgaacacaagtcgtcgtatcagttgaatccgttctcactaacaatggacaaatccca
gccgatcctatcagtcatattctggcggcatttctttataccggtctcaaagaatccctt
aaaaatgaccccttcgatattcacttcatctgcccggaaaagcctttcgagatgtgtgag
caagacttcagttacattcctgatgaggtcatagaggttaaacctatcattcgatatagc
ccaaagtcattgcaagttaaggtattgatcgatggtgaacaaaatagttttgagtttcaa
agctacaagctatccttcgataggctagatgaggagttcgatgagctattactcaactta
gtcgagaagttcaccgatgataataatcgaaaacgagtgatttcatcgttatttgaatgg
ctaaagagaccaaatgatccaagcttaagtatcgatagaattaaactatcggcttatggc
tatagccaacaggtgctcaacgagccctttgttatcgatttactcaagcaatcggcacag
caatgtgatgcagattgcccgattatttacggctcttttggtcgagtcatgttaaaccaa
taccttaaaacagataaactcgacgatttacagcaagccatccattttttactacaaggc
tctccagaatacttacccgacacaaggttaaagcttgctgcggcttatgcgctttcaggt
gagagagaaaagtcacatcaattgctaaaagaagtagataaggtctcgtttatcgcagtg
aaaaaggccttacactattaccttgatattacccacctaaacaaagccagcacagcgcct
tttcactcccataaaaattacttagcgacgcaacttgttagtcgagctgaacaagaaaaa
agtaaggttttaatcagacttgagtaa
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