Shewanella psychrophila: Sps_02379
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Entry
Sps_02379 CDS
T05063
Name
(GenBank) Neisseria PilC beta-propeller domain/von Willebrand factor type A domain
KO
K02674
type IV pilus assembly protein PilY1
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spsw02044
]
Sps_02379
02035 Bacterial motility proteins [BR:
spsw02035
]
Sps_02379
Secretion system [BR:
spsw02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Sps_02379
Bacterial motility proteins [BR:
spsw02035
]
Pilus system
Pilus assembly proteins
Sps_02379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Rop
Motif
Other DBs
NCBI-ProteinID:
AQS37533
UniProt:
A0A1S6HPT7
LinkDB
All DBs
Position
complement(2717261..2720776)
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AA seq
1171 aa
AA seq
DB search
MWIKRFLCAVIVSLGTISGVTHGDDTELYVFESSARSGARPQVLIIFDNSGSMDTSEYTE
TFYERGETVSDSTKLYYSKGGVGVPESASNNYIFQSVNGCKTSKVYLESYGFFTGFIREY
GFTGENGTWTELPDELGSTVTYVDCFEDFEDDAALQFSNATGVSDGFPVDSLGSKASPIP
YTNVTSSSSSSDKTAAIDKAFLTKFGIGKSVTLYTKTYIDWYHSTKSKRWTTRMEIAKRV
MEDTVVTTPSVDFGLSVFNYNTGRTSDGGRIISGIQRRNAASKKTLVETINNLDADTWTP
LCETLYEAYRYFSGGKVKFAKEAGSLDPERDRSVEDGNYYISPFGETQCSNRSYVVYVTD
GSPTRDTAANSLVKGMSGYRSADKEDGSYLPALASILNRKDVNTNLEGDQFVSTFTIGFS
DGADDAAPILKKTADLGGGAYFAAKDATQLQSALSQVFSQILEVNASFTSPSIASNNFDR
TQTFDSVYYAMFLPNKGPRWMGNIKKFRVTGSGDIVDKNGALAIGTDGNLKASSCSYWTP
NSVCSGSSGGGDGNDVRVGGAAHTLRGTTTRKLYGNLGTGGSLKLLTKSNASNSAGGDSA
LAAYMGVNSTELNKLFDWAKGKDVDDDDNDNSTSDIREDVLGDPLHSKPLAINFGSSSSP
DLRILVGTNHGFLHMFKDSGDSVAESWAFMPYELLPNLVELRANVPTGVHSVYGMDSPPV
AYVKTGSGGIEKAWIFAGMRRGGKSYYAIDITSPDSPSYMWKIDSDSAGMSELGQTWSEP
VITLIPGWPIGNTDPASASPVLIFGAGYSPSSKDPAAVGLPDVQGRGVFIVDAKTGVLVH
AFGPSSGTSVTQMPGITDSIPNSVAVLDANGDRLTDRIYATDTGGNVWRMDLPSASPKSS
TNPWTAFKFADLGGSTLASDRRFFSEPAVAQTVFTNLSEVDVTVGGTTTKTKTYQNVAYD
AVVVGTGHRPHPTDTSRSDMFYMLQDRHVISRSFNGAPGNEVPEALTLANLYNVTSAVPS
SDADNISFGLKRGWYYGFGSLGEKSLAGASIIEGRVFFTSYVPGDTASSTQCLVSGVGRL
YGFDLHKGTRSYTHEYLEMGERVPDTPQLVIPPNGNGDSYMYLIGIGAAGDEMEKSGGGG
GGGDGDGCPPGDEKCVGGGLGVNRIYYHINE
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtggattaaacgttttctttgtgccgttatcgtgagtttaggcacgatatctggagtg
actcatggagatgatactgagctctatgtatttgagtcatcggcacgttccggtgcaagg
ccacaggttctgattatcttcgataattcgggcagtatggataccagtgaatatacggag
actttttacgagcgtggggaaacagtcagtgattctaccaaactctattacagtaaaggc
ggtgttggggttccggagtccgctagtaataactatatttttcaaagtgtaaatggttgt
aaaacctcaaaagtatatctggaatcttatgggtttttcactgggtttattagggagtat
gggtttacaggtgaaaatggtacctggacagagttacctgatgaactaggaagtactgtt
acatacgtggattgcttcgaagatttcgaagatgatgctgctttacaatttagcaatgct
acaggggtttccgatggttttcctgtagatagcttaggctctaaagcatcgccaataccc
tataccaatgtaaccagtagttcatcttcttcagataaaacagctgctattgataaagca
tttttgacaaagtttggtataggtaaatctgttactttatacacaaaaacttatattgat
tggtaccatagcaccaaaagtaaacgctggacaactcgaatggagattgccaagcgagtc
atggaggacactgttgtcactacacccagtgttgattttgggttatcggtatttaactat
aatacaggccgaaccagtgatggtggacgtattatatcgggaatacagagacgaaatgcg
gccagtaaaaagacattagttgaaacgattaataatctagatgctgatacttggacacca
ctatgtgaaaccttgtatgaggcctatcgttacttttctggtggaaaggttaagtttgct
aaagaagcgggaagtttagatcctgaacgcgatagaagtgtcgaggatggtaactattat
atttccccatttggtgaaactcagtgctcgaatcgctcctatgtcgtttacgttaccgat
ggctcgccaactcgtgatacagcagctaattctttggtgaaaggtatgtcgggctatcgc
tctgccgataaggaagatggaagctatcttcctgcactcgccagtattttaaatcgcaaa
gatgtaaacacaaatttagagggtgatcagtttgtcagtactttcactattgggtttagt
gatggtgctgatgatgccgctcctatattgaagaaaacggcagacttaggtggaggtgca
tactttgctgcgaaagatgcgactcaattacaaagtgcactttcacaagtcttctcacag
atcttagaggtcaatgcgagcttcacttcaccttccattgcaagtaataatttcgataga
acccaaacatttgattctgtttactacgccatgttcttgcccaacaaagggcctagatgg
atgggtaatatcaagaagtttagggtgacaggtagtggtgatatcgtcgataaaaatggt
gctttggcaataggcactgatggtaacctcaaagcatcctcgtgctcatattggacccca
aattcagtttgctccggttctagtggaggaggtgatggtaatgatgtccgagtcggtgga
gccgcacatactttgagaggaaccactacaaggaagctctatggcaatctaggcacaggt
ggttcgttaaagttgctgacaaaaagtaatgcttcaaattctgccggcggcgacagtgca
ttagcggcatatatgggagttaatagcactgaactcaataagttatttgattgggctaaa
ggtaaagatgtcgacgatgacgataatgacaatagcaccagtgatattcgtgaggatgta
ctaggtgatccgctgcactcgaagccgttggccattaacttcggaagttcatcatcacct
gatctgcgaatattggtggggacaaatcatggcttcttacacatgtttaaggactcggga
gattcagtcgctgagtcatgggcatttatgccctatgagttgttacctaatttagtcgaa
ttaagagcgaatgttcccaccggagtacactcagtctatgggatggacagccctccagtg
gcctatgtgaaaacgggctcaggcggaatagagaaggcttggatctttgccggtatgaga
cgtggaggcaagtcttactatgctattgatattactagtcctgactctcctagctatatg
tggaaaattgattcagatagtgcaggcatgagtgagcttggtcaaacttggtctgagcct
gttattacccttatccctggctggccaataggtaatacagatccagcctctgcttcacct
gtacttatttttggtgctggttactctccttcatcaaaagatccagctgctgttggttta
cctgatgtacaaggtcgcggtgtatttattgtagatgctaaaacaggagtgctagtacac
gcttttgggcctagttctggtacaagtgtgacccagatgccagggataaccgatagcatt
cccaattctgttgccgtgctcgatgctaatggtgataggttgaccgatagaatttatgcg
accgatacaggcggcaatgtttggcgtatggatctcccaagcgctagccctaaaagctcg
actaatccttggactgcgtttaaatttgctgatttaggcggtagtactttagcctctgat
aggcgattcttttcagaacctgcagtggcgcaaacggtatttactaatctgtctgaagtg
gatgtgactgtcggcggaactacaactaaaactaaaacatatcagaatgtcgcttatgat
gcggtagttgtaggtactgggcatagacctcatccgacagacacttcacgttcagatatg
ttctatatgcttcaagatcgccatgttatttctcgctcatttaatggtgcaccgggtaat
gaggtaccagaagcactgactttagcgaatctttataatgtgacatctgcagtgccctcc
tcagatgcagacaatattagcttcggcttaaagcgaggctggtattatggctttgggtca
ttaggcgagaaaagtttagcaggtgcttcaatcattgaaggtcgagttttctttacttca
tatgttcccggagatacggcttcgagtactcagtgtctagtttcaggcgtcggacgactt
tatgggttcgaccttcataaggggactcgttcttatacccatgaatatctagaaatgggc
gagagagtgcccgatacgccgcaattggttattccacctaatggaaatggagattcctat
atgtacctgataggtatcggtgctgctggtgatgagatggagaaatctggcggtggaggt
ggaggtggagatggagatggatgccctccaggtgatgagaaatgtgttggtggtggctta
ggtgtcaaccgtatttactaccatatcaacgagtaa
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