Shewanella psychrophila: Sps_02396
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Entry
Sps_02396 CDS
T05063
Name
(GenBank) OmpA family/OmpA-like transmembrane domain
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_02396
Transporters [BR:
spsw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sps_02396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
OprF
DUF748
Phenol_MetA_deg
YfaZ
TSP_3
Opacity
Porin_4
Motif
Other DBs
NCBI-ProteinID:
AQS37550
UniProt:
A0A1S6HPU6
LinkDB
All DBs
Position
2740024..2741124
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AA seq
366 aa
AA seq
DB search
MMNNTLKAILLTSMLPFAANAAQELTPWYVGGGLGVNNYEPNCDMKTMKSCGKDDPYAWD
VFGGYLFNDYFGVELGYRDLGRAEWVDYANKMNDVGAKGLTLGVVGFWPIANRWSLSAEA
GAMNYTLSNNKEYGSEYYSDSGIAPYIGAGIGYNITENLKLQAKYRRYENLDEDKWNTLA
MESNYWGLELSYRFGTPAPVVVAPLVLAPIDSDNDGVTDDIDQCPDTPANHKVDAKGCTV
YTETTEQRDVGSIQFANNSSVVKTESFERIEKLATYMNKNPKSTVLISGHASDIGKADYN
MALSDKRAKAVAKILVEKYGISQDRVEAKGFGITQPVIQGNSAEANKANRRIEAHVTGVK
KEALIK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaatacattgaaagctattctgctgacttcaatgctccctttcgctgctaac
gcggcacaagaactcactccttggtatgtcggtggcggtcttggcgtaaataattacgag
ccaaactgcgacatgaagaccatgaagagctgtggcaaagatgatccttacgcatgggat
gtgtttggtggttatcttttcaacgactatttcggcgttgaattaggttatcgcgatctt
ggccgtgccgaatgggtcgattacgccaacaagatgaatgatgtaggtgctaaaggattg
accctaggtgttgtgggtttctggccaatcgctaaccgctggagcctatcggctgaagct
ggtgcgatgaattacactctgtcgaacaacaaagagtatggcagtgagtattacagtgac
agcggtattgcaccatacattggcgcaggtatcggatataacatcaccgaaaacttgaaa
cttcaggccaagtatcgtcgttacgaaaacttagatgaagacaagtggaacacacttgct
atggaaagcaactactggggtctagagcttagctaccgtttcggtactccggcacccgtc
gtagtcgctcccttggtcctagcgcctatcgattcagacaatgatggcgtcaccgacgat
atagatcagtgtccagacactcctgccaaccacaaggttgatgcgaaaggttgtacagtt
tacacagagacgacagaacagcgcgatgtgggctctatacagttcgcgaataactcgtct
gtggtaaagactgagtctttcgagcgcattgagaagctggccacttacatgaacaagaac
cctaaatcgactgtgttgatctcgggtcacgcttcagatataggtaaagccgactacaac
atggccttgtcagacaagcgtgcgaaagccgttgctaagatccttgtcgagaagtatggc
attagccaagatcgcgtagaagctaaaggtttcggtatcacacagcctgttatccaaggt
aacagcgccgaagccaataaggctaatcgtcgtatcgaagctcacgttactggcgtgaaa
aaagaagcactgattaagtaa
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