Shewanella psychrophila: Sps_02444
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Entry
Sps_02444 CDS
T05063
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_02444
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sps_02444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AQS37598
UniProt:
A0A1S6HQ23
LinkDB
All DBs
Position
complement(2791486..2792397)
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AA seq
303 aa
AA seq
DB search
MSHLNYNHLYYFWMVHKKGSVAKAAEALCLTPQTVTGQIRVLETRFKGSLFKRVGRSLEP
TELGELVFRYADKMFSLSYEMLDLLNYQKDENILFEVGIADALSKALASRVLLSVVPSDG
SMHLACFEATHENLMTRLREHKLDMILSDCAGESLKYPEILSKKLGECGVAFFSAEKYDK
PFPECLEQGKLLIPGKRTSLGQQLHHWFDENGLNVNILGEFDDAAMMKAFGYFKQGIFVA
PSIYKQDILSHDMHLLGETTDIKEVYHVMFAERMIQHPAVKRLLETDFTDLFEGRDAQVQ
HLL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatctgaattataaccacctctactacttttggatggtacataaaaagggctcg
gtggcgaaagctgctgaggctttgtgcctcacaccacaaactgttactggacaaatccgg
gttctcgaaactcgttttaaggggagcctatttaaacgagtgggtcgaagcctagagcct
acagagctaggagaactggtatttcgttatgccgataaaatgtttagcctcagctatgag
atgctagatctgcttaattaccagaaagatgagaatattctgttcgaggttggtattgcg
gatgccttgtctaaagccttagcaagtagagtcttactttcggttgtacccagcgatggg
tccatgcatctggcctgtttcgaggctacacacgaaaacttgatgacaagattaagagaa
cacaagctggatatgattctgtctgattgcgctggagagtcgcttaaataccctgagatc
ttatctaagaagttaggcgaatgtggagtcgcttttttctctgccgagaagtatgacaag
ccgtttcctgagtgcttagagcaaggtaagttactcattccgggcaagcgaacttccctt
ggccaacagctacatcactggttcgatgaaaatggactcaacgtcaatattcttggcgaa
ttcgatgatgcggccatgatgaaggcttttggatatttcaagcaagggatcttcgtggcc
ccctctatctacaaacaagatatcttgtcccatgatatgcacttgttaggtgaaactacc
gacattaaagaggtataccatgtcatgtttgccgagcgaatgatccagcatccggcagta
aagcgtctattggaaacagatttcaccgacttgtttgaaggccgggatgcgcaagttcag
catcttttatag
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