Shewanella psychrophila: Sps_02679
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Entry
Sps_02679 CDS
T05063
Name
(GenBank) transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_02679
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sps_02679
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
AAA_5
AAA
Mg_chelatase
GAF_2
AAA_2
HTH_8
GAF_3
AAA_22
AAA_3
MCM
Hpr_kinase_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AQS37831
UniProt:
A0A1S6HQR1
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All DBs
Position
complement(3067045..3068757)
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AA seq
570 aa
AA seq
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MMCFFYLHAMVRLYSTTWLVRAGKNAATFMTMIDISSTALIELALDLTNSLTTKDRFERL
LSTVRRTVSCDAVVLLHVQGGRLKPLAQQGLSKDSLGRRFDIQAHPRFEVICGSSTPVRF
AADCVLPDPYDGMLLAHEGDLPVHACMGLPLLADDQLIGVLTLDSMTPQVFDELPKRTLD
IISAMSAATLKTAILLQELESHSQHSQELVAELTNEALVKDGGELIGDSPVMLKLKREID
MVAVSGFSILIEGETGVGKELVARTLHRQSARAEGPLVYVNCAALPENLIESELFGHVKG
AFTGADRNRTGKFSLADGGTIFLDEIGELPLGVQSKLLRALQSQEIQPVGKDATEQVNVR
ILAATNRKLKLEVSEGRFRADLYHRLSVYPISVPPLRAREGDVTMLAGYFIEQIRRKLGI
RQLAIDASAMGILNRYDWPGNVRELEHVIGRAALRARGRGNQAIVRIDTRHIEQLVDSVG
RSEDKLEFSASNGLNADLLTTGLMVENGASIGLKLETETFQRKLITRVLSQESGNWSAAA
KRLQTDRANLSRLAKRLGISVIKAVTLSGS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgttttttctatctgcatgctatggtcaggttatattccacaacctggctcgtt
cgagcaggcaaaaatgcggcaacgtttatgactatgatagatatctcttcgacggctcta
atagaattggccctagatttgactaacagcttgaccaccaaagatcgtttcgagcgttta
ctcagtactgtgcgtcgtaccgtgagttgtgatgccgtggtcttgttgcacgttcaaggt
ggtaggttgaaacccttggcccaacagggtctgagcaaagacagcctggggcgacgtttc
gatattcaggctcatcctagattcgaggttatctgtggctcctcaactccggtgcgcttc
gccgccgactgcgtgcttcccgatccctatgacggcatgttgttagctcatgaaggtgac
cttccggttcatgcttgtatgggtttaccgctgcttgccgatgaccagcttatcggggtg
ctgaccttagatagcatgaccccacaagtgtttgatgaattacctaagcgtaccttagat
atcatctccgccatgtcggcagcgaccctaaagacggcaattttactgcaagagttggag
agtcattcccaacacagtcaggagctggttgccgagctgacaaacgaggctctggttaag
gatggtggcgagttgattggtgatagccctgtgatgctaaagcttaaacgagagatcgat
atggtggcggtctcaggtttttcgattcttattgaaggtgaaactggtgtgggcaaggag
ctggtggccagaaccttacataggcaatcggcgcgggcagaagggcctctggtctatgtt
aactgcgccgcactgccggaaaacctgatcgagagtgaactgttcggtcatgttaaggga
gcatttaccggggccgatagaaatcgtactggtaaattcagtctggccgatggcggcact
atttttctcgatgagattggtgagcttcctttaggtgtacagagcaagttactgcgggca
ctgcagagccaagagatccagcccgtggggaaagatgccaccgaacaggtcaatgttcgc
attttagcggcgacgaacaggaagcttaagttggaggtgagtgagggacggtttagagct
gatttgtatcacagactgagtgtctatcccatctctgtgcctcctcttagggctcgggaa
ggggatgtgactatgttggcggggtatttcattgaacagatccggcgcaaattaggcatc
cgtcagctggcaattgatgcttcggccatgggcattctcaatcgctatgattggcctggt
aatgttcgtgagttggagcatgtgataggtcgcgctgcactcagagccagaggacgcggt
aatcaggctattgtgagaatagataccagacatatcgagcaattagtcgattcggtggga
cgttcagaagataagttggagttttcagcctcgaatgggttaaatgccgatttgttgacg
acgggactaatggtggagaatggagcgagtattggccttaagctggaaacggaaacgttt
caacgtaagcttattacccgagtattgagtcaggaatctggaaattggtcggctgcggct
aaacgcctacaaacagatagagccaatctgagcaggttagcaaagaggttagggatcagt
gtgataaaagctgtcacccttagtggtagctga
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