Shewanella psychrophila: Sps_02825
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Entry
Sps_02825 CDS
T05063
Name
(GenBank) transcriptional regulator, LysR family
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_02825
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sps_02825
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
GerE
Motif
Other DBs
NCBI-ProteinID:
AQS37977
UniProt:
A0A1S6HR01
LinkDB
All DBs
Position
3223780..3224736
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AA seq
318 aa
AA seq
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MKNIKNKMSNKRSIIPKAVTEYDLRLLRIFRTVVENGGFSASEAELGVTRSTISVHMSNL
ESRMKLKLCSRGRGGFALTEDGQTVYHACIELFDSLNDFSRLVNSLGEELSGELIMLCAD
QLDTRMQLKLAEVVKKIHTAQPQLHLVLDNEALKHIEKCLLKEKAHIGLLPSYQQVEGLD
YQTIYNEPIYLCCSHSHPFFLLEDNEISADMLAQTPAIHPGIDIDADGREQLKQLNLSAK
AYQFDTRKTLILSGCYIGYLPLSYIQQELESKQLKIIHSDSASYQFNLSLVSKHNPRETS
KIELLKTIFNEVFNKEQG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacatcaagaataaaatgagtaataagcgctccatcatcccaaaagcagtcacc
gaatatgacctacgcctgctgagaattttccgtactgtagttgaaaatggcggcttctca
gcatcagaagccgaactcggcgtgacccgctcaaccatcagcgtgcatatgtctaacctc
gagagtcgcatgaaactcaaattatgcagccgaggacggggtggctttgcgctgacagaa
gatggtcaaacggtctaccatgcctgtatagaactattcgactcgcttaatgatttttca
aggttagttaatagcctgggcgaagaactcagtggtgagctcatcatgctgtgcgccgat
cagctcgatacacgaatgcagcttaagctggcggaagtcgtgaaaaagatacatacggcc
cagccacaattgcaccttgttctcgacaatgaggctctgaaacatatagaaaaatgtctg
cttaaagagaaggcacatataggattattgcctagctaccagcaggttgaagggctggat
taccaaaccatttacaacgagcctatatacctatgctgtagccattcacatccatttttc
ctgcttgaagataatgaaatcagcgctgatatgttagcccaaacaccagccattcatccg
ggaatagatatagatgccgatggaagggagcaattaaaacagttaaatttatcggctaag
gcctatcagtttgatacacgtaaaaccttaattttatctggctgctatataggttaccta
ccactgagctacattcaacaggaactcgaatccaaacaactgaagattattcacagcgac
agtgccagttatcaatttaacctctccctagtgtctaaacataaccctcgtgagaccagt
aaaattgaattactgaaaacaattttcaatgaagtttttaacaaagagcaaggctaa
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