Shewanella psychrophila: Sps_02833
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Entry
Sps_02833 CDS
T05063
Name
(GenBank) pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsw03009
]
Sps_02833
Enzymes [BR:
spsw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Sps_02833
Ribosome biogenesis [BR:
spsw03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sps_02833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
IpgD
Motif
Other DBs
NCBI-ProteinID:
AQS37985
UniProt:
A0A1S6HR28
LinkDB
All DBs
Position
3230888..3231652
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AA seq
254 aa
AA seq
DB search
MTQDTSPIRLAKYLAMTGLCSRRAATRFIRDGRITIDDRLANHIDTVTLVQSKVESKTGI
NSQETLKFDGVLIQGIESKQYWMLNKSVGTDCRLLIDDPSSLLHLLPASPRLYPVGRLDK
DSRGQLILTNDGELTQQLMHPNFGHSKTYHVQVDRDFDDSFLIKMAQGVSYRDVTTLPCK
MSRLANNKFEIILTQGLNRQIRRMSQALGYKVVDLKRVSIQTLALGKLGEGEMRQLSGSE
LSLLIESCRPSNEA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagacacctcaccaatccgcttggcaaaatacctcgccatgacaggactctgc
tcccgccgagccgctacccgctttatcagagatgggcgcatcaccatagatgaccgcctc
gccaaccatatcgatacggtcaccctagttcagagtaaagtggagagtaaaacgggcatt
aacagccaagagacactcaaattcgacggtgtacttattcagggaatcgagtctaaacag
tactggatgctcaacaagtctgtcggcacagattgccggctattaatagatgatcccagc
tcactactacacctgctaccagctagccccaggctctatcctgttggccgcttagataaa
gactcccgtggccagctgatactcaccaacgatggcgagctaacccagcagttaatgcac
ccgaatttcggtcatagcaagacctatcatgtgcaagttgatcgcgacttcgatgacagt
ttcttgataaaaatggcccaaggggttagctaccgcgatgtcaccaccctcccctgcaag
atgagccgcctggctaacaacaagtttgaaataatactcacccaagggctcaaccgacaa
atccgccgcatgagccaagctttgggctataaggttgtagaccttaaacgggtgagtatc
caaaccttagcgcttggtaagcttggtgaaggagagatgagacagctctctggttcagag
ctttcccttctcatagaaagttgccgaccttcgaatgaagcttga
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