Shewanella psychrophila: Sps_02892
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Entry
Sps_02892 CDS
T05063
Name
(GenBank) SSU ribosomal protein S6P modification protein
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsw03009
]
Sps_02892
Ribosome biogenesis [BR:
spsw03009
]
Prokaryotic type
ribosomal protein modification factors
Sps_02892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Zn_protease
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
GARS_A
R2K_3
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
AQS38040
UniProt:
A0A1S6HR88
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All DBs
Position
complement(3301339..3302733)
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AA seq
464 aa
AA seq
DB search
MTNKIIVGSEEWCSLPGLGIKAVKARVDSGAATSSIHAINITTFKRNGSTWVSYEVHPIQ
GSRKVTLLCESKLIDRRVIKSSNGETERRYVIREQLQLGDQSWDVDLTLTNRASMGFRML
LGREAMGQRILVDPSVNYNFGDYTEDEINLLYGNKNMPSTGLKIGLLASNPNLYSNRRIM
EAGLQRGHEMFFYNIQQCYMKLDASEPEVHYRDGRILNDLDAVIPRIRPSMTFYGCALTR
HFESLGVMALNNSEAITQSRDKLFSLQLLQKNNLDIPTSGFANSPADTTDLIDMVGGAPL
IVKLLEGTQGKGVVLAETRKAAESVINAFKSLKANLLVQEFIKEAQGKDLRCFVIDGKIV
ASIERTAAPGEFRANIHQGGTASLVQITPEEKKLAIKAAKTMGLQVAGVDIIRSSKGPLL
LEINSSPGLEGIETATGIDVAGAMIDSIEKKLGWKRPLPVDTSF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgactaataaaatcattgttggcagtgaagagtggtgctctttacctgggctaggtatc
aaggcggttaaggctcgtgttgactccggggctgcaacatcctcaattcacgcgataaat
atcacgacttttaagcgtaatggaagcacttgggtcagttatgaggtgcatccaattcag
gggagccgaaaggtgaccttactttgtgagtcgaagcttatcgatcgtcgtgtaattaag
agttccaatggtgaaaccgaaaggcgttatgttatccgtgagcaattgcagcttggggat
caaagctgggatgtggatctgactttaactaatcgagctagcatgggctttcggatgctc
ttgggacgtgaggctatggggcagaggatcttggttgatccttcggttaactacaacttt
ggtgattataccgaagatgaaatcaatctcttgtatggcaataaaaacatgccgagtacg
ggcctcaagattggcttgcttgccagtaacccgaatttatacagtaatcgtcgtatcatg
gaggcgggactgcaacgtggtcatgagatgtttttctataacatacagcaatgttatatg
aagctggatgcctctgagcccgaagtgcattatcgtgacggcaggatcttaaatgatctc
gatgcagtgatccctagaattcgccctagtatgactttttatggttgtgctttgacgcgc
catttcgagagtttgggggtcatggcactgaataactcggaagccatcactcagtcgcga
gacaagttgttctctttgcagctattacagaaaaacaacttagatatacccaccagtggc
ttcgccaattcaccggctgatactacggacttgatcgatatggttggcggggcaccgtta
atcgtcaagttactcgaaggcactcaaggcaaaggtgtcgttctggctgagacccgcaag
gctgcagagagcgtgattaatgcgtttaaatccttgaaggctaatttgctagttcaggaa
tttattaaggaagcccaaggcaaagatctgcgttgctttgtgattgatggcaagattgtc
gcgtccatagagcgtactgccgcgccgggtgagttcagggcgaacattcatcagggaggc
actgcttctcttgtgcagatcacccctgaggagaagaagctggcaattaaggcggcgaaa
accatgggtctacaggttgcgggtgtcgatattattcgttccagtaagggacctctgtta
ctggagataaattcatccccaggattagaaggcattgagacggcaactggcatagatgtc
gcaggcgctatgatcgattccatagagaaaaagttgggctggaagcgacctttaccagtc
gatacttctttctaa
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