Shewanella psychrophila: Sps_03025
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Entry
Sps_03025 CDS
T05063
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K15727
membrane fusion protein, heavy metal efflux system
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_03025
Transporters [BR:
spsw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sps_03025
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AQS38172
UniProt:
A0A1S6HRN6
LinkDB
All DBs
Position
complement(3462916..3464172)
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AA seq
418 aa
AA seq
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MNIQSKSIKNRFKSMNTDMKNQQQTQTLATPFHLNALARAMSFAFLMTLTAAVVTPSTAF
AGEGHDHGAETTETAKAPAAEESGEDHALKLTAEQQALAGVEVMQLSEESFNLEAVATAT
LVVDRDRTMALAPQVDVRVLERHVVPGQEVSKGEPLLTLGGVAVAQAQADYINAEAEWSR
VKRMGKSAVSASRRLQAQVDAELKRAILEAMKMTPVQIAKLESNPSTIGSYQLLAPINGR
VQQDIGFLGQVITAGTALMQLTDESHLWVEAQVTPAQSENISIGSKALVRVGDRTLEAKI
IGRSHELNSVTRTEQILVSLENPGHVIHAGQFAELYLPSSVQGGVILPDAALTRGGDGDW
QVFIQDEDGFEAVEVEVVERQRGMNLVRGLTPGSNVVVSGAFFLASEQAKSGFDIHNH
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacaaagtaaaagcataaaaaatagatttaagagcatgaatacagatatgaaa
aaccaacaacaaacacagacactagcaacaccctttcatttgaatgcgcttgcaagagcc
atgagttttgcatttttaatgaccttaaccgcagcagttgtcactccttcgacagcattt
gccggggaaggccatgatcacggcgccgaaacaacagaaacagctaaggctccagcagca
gaggagagcggagaagatcatgcacttaagttaaccgctgagcagcaagcccttgcgggg
gttgaagtgatgcaactgtctgaagagtcgtttaatttagaagcagtagccacggcaacg
cttgtggtcgacagagatagaaccatggccttggcaccgcaagtcgatgtgcgcgtattg
gaacgccatgttgtgccaggtcaagaggttagtaaaggcgagcctttattaactttaggc
ggcgtcgccgttgctcaggcacaggccgattatattaatgccgaggctgagtggagccgg
gtaaaacgcatgggtaagagcgccgtcagcgctagccgtcgcttgcaggcgcaggtcgat
gctgagctcaaacgtgcaatcttagaagcgatgaagatgacgccagttcagatagctaag
ctggagtccaatccaagcactatcggtagttatcaattattagcaccgattaatggccga
gtgcagcaagatatcggtttcttaggtcaagtgatcaccgcgggtaccgcgctcatgcag
ctgaccgatgagtcacatctatgggtagaagcacaggtaaccccggcacaatctgaaaat
atcagtatcggtagcaaggcattggttcgtgtgggtgacagaactttagaagctaagatc
ataggtcgctcacatgagcttaacagcgtgactcgcaccgaacagattttagtaagccta
gaaaacccaggccatgttattcatgccggacaatttgccgagttgtacttaccaagttca
gtccaaggcggggtgatcttacccgatgcggcattgactcgtggcggcgatggtgactgg
caggtatttattcaggatgaagatggcttcgaggcagtagaggtcgaagtggttgagcgc
cagcgtggcatgaacttagttcgtggcctaacgcctggcagtaatgttgtggtatcaggg
gcatttttcttagcctcagagcaggctaagtccggcttcgacatacataaccactaa
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