Shewanella psychrophila: Sps_03084
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Entry
Sps_03084 CDS
T05063
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00300
Lysine biosynthesis
spsw00470
D-Amino acid metabolism
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01120
Microbial metabolism in diverse environments
spsw01230
Biosynthesis of amino acids
Module
spsw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sps_03084
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sps_03084
Enzymes [BR:
spsw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Sps_03084
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
AQS38231
UniProt:
A0A1S6HRV5
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All DBs
Position
complement(3538222..3539064)
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AA seq
280 aa
AA seq
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MIHFTKMHGLGNDFMVVDGVTQNVFFSPEQIKRLADRNFGIGFDQLLLVEPPYDPELDFH
YRIFNADGGEVEQCGNGARCFARFVRNKGLTNKQKIKVSTSNGKLTLRLERDGNVTVNMG
IPILEPSKIPFNAKRPEKTYLLQADIAESKVQTFLCGAVSMGNPHCVLDVEDIQTADVEG
IGALLTQHDRFPKGVNVGFMQVINSGHIKLRVYERGAAETLACGTGACAAVVVGLLQGKL
DKSVRVDLPGGTLTINWEGEGKPLWMTGPAEHVYDGQIQT
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgatccatttcactaagatgcatggtttaggcaatgattttatggtggtcgacggcgta
acacagaatgtgttcttctcgcctgagcagatcaagcgccttgcggatcgaaattttggt
ataggtttcgatcagttgcttttggtggagcctccttatgatcccgaacttgatttccac
tatcgtattttcaatgcagatggaggagaggttgagcagtgtggtaacggcgcacgttgt
ttcgctcgatttgtgcgtaacaagggcttgaccaacaaacagaaaattaaagtcagcacc
tccaacggcaagctcaccctgcgactggaacgagacggcaatgtcaccgtgaatatgggg
attccgatactcgaacccagtaagatcccttttaatgctaagagacccgaaaaaacatat
ttgttacaggctgatattgcagaatctaaggtgcagacctttctctgtggcgccgtttca
atgggtaacccacactgtgttttggatgtggaagatattcagactgcagatgttgagggg
attggggctttattaactcagcatgatcgctttccaaagggagtgaatgtcggttttatg
caggtgattaactcaggtcatattaaacttagagtatatgagcgaggcgcagcagagacg
cttgcttgtggtacaggagcatgtgctgcggttgtcgtgggtttgttgcaaggtaagctc
gataaaagtgttcgtgtcgatctccccggcggtactctgactattaattgggaaggagag
ggtaagcctttatggatgactggacctgcagaacacgtatatgacggacagatacaaaca
tga
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