Shewanella psychrophila: Sps_03098
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Entry
Sps_03098 CDS
T05063
Name
(GenBank) type I secretion system ATPase, LssB family
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
spsw
Shewanella psychrophila
Pathway
spsw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sps_03098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_03098
02044 Secretion system [BR:
spsw02044
]
Sps_03098
Transporters [BR:
spsw02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Sps_03098
Secretion system [BR:
spsw02044
]
Type I secretion system
Adhesin protein transporter
Sps_03098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_29
AAA_13
AAA_22
MMR_HSR1
nSTAND3
AAA_23
NACHT
DUF87
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AQS38245
UniProt:
A0A1S6HRV6
LinkDB
All DBs
Position
3566953..3569127
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AA seq
724 aa
AA seq
DB search
MSVTTSQKTEQWAVSASQRVSVDPLLDSLVLLTEYFGSPCSSESLAAGLPLSSSVLTPDL
VPQAAGRAGLTAKLTRKGLDQVSPIFLPCILLLKDKKACLLREIDFDKDRAVIQLPETGG
EQVLSIEELEAIYVGYLFLVKQQYRGDMGFDVHQHDTGSHWLLQTLKDSAPIYRDALIAS
VLVNIFALVSPLFIMNVYDKVVPNLAFESLWVLAIGAGIAYIFDLIMRQLRAYLIDVAGK
KVDIIVSSRLFAKAIGIPLEKRSPSVGGMAKQLGEFDSIREILTSATITTLVDLPFAIFF
MIIIYVVAGDLAIIPLIGSIIIIGYTLIVQPKLKAAIEESNKFSSLKHGHLIESLASLES
IKSSGAEGLVQKSWQQMIGHTANWQLKSKKLSTSVTNLANFTVQLSVVCVVILGVYRVAD
NAISMGGIIAAVILSSRAISPMAQLAGLMTRGNHTASALRQLDEIMTQEDEFENKGHLVS
RQRLEGQINADHISFSYPGSEKPVLHTMSLNIKPGERIAIIGRNGSGKSTLAKMLVGLYQ
PTKGSLRYDGLDSAQIHPTDLRRNFGYLPQDITLFHGSIRDNILFGTRQVTEHQLIRAVQ
LSGINLFTDLETEGLDQQVGEGGQSLSRGQRQTVALARATLNDPPVLLMDEPTASLDARA
EKQFIRAMENVSRDRTLLLITHKMHLLKLVDRIIVLDRGHVIADGPKDEVLDKLSKGLLS
GASK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtaactacttctcagaaaactgagcaatgggctgtctctgcttcacaaagagtc
tctgtcgaccccttgctagacagtttagtcctactgaccgaatatttcggtagcccatgc
tccagtgaatcactggcggcaggactgcccctatcctctagcgtcctcacaccagatctg
gttcctcaagcagctgggcgagctggcttaacggctaaattaacccgtaaggggctggat
caagtatcgccaatcttcttaccttgtatcttgctgctaaaagataaaaaagcctgcctc
ctcagggagatagatttcgataaagacagagccgttattcaattgccggaaactggtggt
gagcaggttttatccatagaagaattagaagcgatctacgtcggttatttgtttctggtc
aaacagcaataccgtggcgatatgggtttcgacgttcaccagcatgacactggcagtcac
tggctattgcaaacccttaaagattccgcgccaatttatcgagacgcgttgatcgcttcg
gtattggtcaatatattcgccttagtttcgcccctctttatcatgaatgtctacgataaa
gtggtacctaacttagcatttgaatctctgtgggtcttggccattggcgcaggtattgcc
tatatttttgaccttatcatgcgacaactgagggcttatcttatcgatgtcgcaggtaag
aaggttgatatcatagtctcttcacggctattcgctaaagccataggcataccattagag
aagcgctcaccaagtgtaggtggcatggcgaaacaactaggcgaatttgatagcattcga
gaaattttaacctctgcgacgattacaactttggtggatctccccttcgccatcttcttc
atgatcatcatctacgttgtggcaggagatctcgcgatcatcccgctaataggcagcatc
atcattatcggctataccttgatcgtgcagccaaaactgaaagctgcgatagaggagagt
aataaattttccagcctcaaacatggccacctcattgaatctctggcttctctggagtca
ataaaatccagtggcgctgaaggcttggtccaaaagagctggcagcagatgataggtcat
actgcaaactggcagttgaagtcaaagaagctatctacttcagtgactaacctagccaac
ttcaccgtacaactttcagtcgtatgtgtggttattttgggtgtttatcgagtagcagat
aatgcgatctctatgggtggtattatagccgcggttatcttatcgagccgcgcaatctct
ccaatggcacagctagcaggcttgatgaccagaggtaatcataccgccagtgctctgcgc
cagctagatgagataatgacgcaggaagatgagtttgaaaacaaaggacacctagtcagc
cgacagcgactggaaggccagatcaatgccgatcatattagcttctcctatcccggatct
gaaaagccggttctgcacaccatgtcactcaacattaaacccggtgaacgcatagctatc
attggacgtaatggatcaggtaagagtaccctggctaagatgcttgtaggcctctaccaa
cctacaaagggaagccttaggtacgatgggctagattcggctcaaatacatcccacagac
cttcgtagaaactttggttacctacctcaggatatcaccctgttccatggttccattaga
gataacatcttatttggtaccagacaggtcacagagcatcaactcatcagagcggtacag
ctttccggaatcaatctatttaccgatctggaaaccgaagggctagatcaacaggttggt
gaaggcggtcaatccctctcccgtggccagaggcagactgtcgcattagcgagagcaacc
ttaaatgatcctccagtgctcttaatggacgagccaacagccagtttggatgcaagagcc
gaaaagcaatttattcgagcgatggagaatgtcagccgcgatagaaccttactgcttatc
acccataaaatgcatctgcttaaacttgttgatcgcatcatagtcctggaccgaggtcat
gtcatcgccgatggtcccaaagatgaggttttagataaattgagtaaaggcttactctca
ggggcctcgaaatga
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