Shewanella psychrophila: Sps_03129
Help
Entry
Sps_03129 CDS
T05063
Name
(GenBank) transcriptional regulator, LysR family
KO
K02521
LysR family transcriptional regulator, positive regulator for ilvC
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_03129
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sps_03129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
SBP_bac_11
PBP_like
Xre-like-HTH
MarR
HTH_38
HTH_23
HTH_24
PrpR_N
HTH_Tnp_ISL3
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AQS38272
UniProt:
A0A1S6HRZ2
LinkDB
All DBs
Position
3606479..3607351
Genome browser
AA seq
290 aa
AA seq
DB search
MDIKTIKLYLHLSESLHFSRTAQAMHVSPSTLSRVMQRLEDEVGAKLFQRDNRSVSLTSA
GVEYRHFAEQTLDHWTKLKTKIDPKQDLLRGRLNLYCSVTAAYSHLPGLLDSFRREHPLV
EITLTTGDAANALSEVKNNRVDIAIAALPDPFPDNLHFAKIDDIPLVIIAPTYRCQVQEL
LTESYIPWDRLPFIVPEHGPGRRRTDNWFKQLGLIPNIYAQVSGQEAIASMVALGCGVSI
TPEIVISNSPVRDRIQIIPTPIDIPPFELGCCCRNNKLDDPIVAAFLKVI
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggacataaaaacaatcaaactttacctgcacttatcggaaagtctgcatttttccaga
acggctcaagcgatgcacgtcagcccctcaacattgagccgggttatgcaaagattagaa
gatgaagtcggtgctaagttatttcaacgtgataatcgcagtgtttccttgaccagcgcc
ggcgttgaataccgtcacttcgccgagcagaccttagatcattggaccaaacttaagact
aagattgaccctaaacaagatttgctcaggggaagattaaacctatactgctcggtaaca
gcggcatatagccatcttcccgggctactcgatagcttcagacgggaacaccctctggta
gaaataactctgacgaccggtgatgccgctaacgcgcttagcgaagtcaaaaataatcgc
gtcgatatcgccattgccgccctgccagacccttttcccgacaacttacacttcgccaag
atagatgatattcccttggtgataatagcaccgacatatcgttgccaggttcaggagtta
ttaaccgaatcttatattccctgggaccgtctgccctttatcgtacctgagcatggaccg
gggagacgacgtaccgacaactggtttaagcagctcggtctgattcccaacatctatgcc
caagtctcgggacaagaagcaatcgcctctatggtggctcttggatgcggggtgagcatc
acaccagagatagtgatcagtaacagtccggtgcgggatcgcattcaaatcatccccacc
cctatagacattcccccttttgagctaggttgctgttgcagaaataacaaattagacgac
cctatcgtggctgccttcctgaaagtgatataa
DBGET
integrated database retrieval system
