Shewanella psychrophila: Sps_03317
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Entry
Sps_03317 CDS
T05063
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sps_03317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsw03021
]
Sps_03317
03400 DNA repair and recombination proteins [BR:
spsw03400
]
Sps_03317
Enzymes [BR:
spsw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sps_03317
Transcription machinery [BR:
spsw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sps_03317
DNA repair and recombination proteins [BR:
spsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sps_03317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1599
Motif
Other DBs
NCBI-ProteinID:
AQS38453
UniProt:
A0A1S6HSF7
LinkDB
All DBs
Position
3815704..3815988
Genome browser
AA seq
94 aa
AA seq
DB search
MARVTVEDAVNQIGNRFDMILVAARRARQIAVQGKDPMVEEENDKPTVIALREIELGLVT
ADTLDADERQTVREREAAEIAAVAAIAEGRNNVI
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaactgtagaagacgccgtaaaccaaatcggcaaccgttttgatatgatc
ctggttgcagcgcgtcgtgctcgccaaatcgctgtgcagggcaaagaccctatggttgaa
gaagagaacgacaagcctaccgttatcgcacttcgcgaaatcgaattaggtctagttact
gctgacactttggatgccgatgagcgccaaactgttcgtgaacgcgaagcagcagaaatt
gctgctgttgctgcgattgccgaaggtcgcaacaacgtaatataa
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