Shewanella psychrophila: Sps_03321
Help
Entry
Sps_03321 CDS
T05063
Name
(GenBank) AMP-forming long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00061
Fatty acid biosynthesis
spsw00071
Fatty acid degradation
spsw01100
Metabolic pathways
spsw01212
Fatty acid metabolism
spsw02024
Quorum sensing
spsw04146
Peroxisome
Module
spsw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sps_03321
00071 Fatty acid degradation
Sps_03321
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sps_03321
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sps_03321
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spsw01004
]
Sps_03321
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsw04147
]
Sps_03321
Enzymes [BR:
spsw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sps_03321
Lipid biosynthesis proteins [BR:
spsw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sps_03321
Exosome [BR:
spsw04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sps_03321
Exosomal proteins of breast cancer cells
Sps_03321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AQS38457
UniProt:
A0A1S6HSD1
LinkDB
All DBs
Position
3820166..3821824
Genome browser
AA seq
552 aa
AA seq
DB search
MESQIKTPVEMLDHWVDTLGDSTYLRQPINGQYQDFSWREVQQKMQQLAGAMRHLGLKPG
DKVAVLSKNCAEWFITDLALMHGGYISVPIYPTANADTIRYVLEHSEAKAIIIGKLDYWA
DQEAGVGGDLLRMAMPYDTMPAQYKWESLLQLGEPLLDAPFATPEQIMTLIYTSGSTGKP
KGAIQTFASYAWTCKAVVRDLKTGVNDRLISYLPLAHITERVAMEGSSFYSGSSVAFVES
LDSFVTDVQRARPTVFFSVPRLWSLFQQNIIGKIGNSKLNFLLKLPIINGIIKKKIHSGL
GLEHCRLLGSGSAPIPPSLIQWYHSIGLNISEAWGMTENSAYSIINYPFDASKIGTVGRA
VEGCLIKQTDSGELLVKSPGLMTGYYKQDELSATSFDEEGYFLTGDLCSIDGDGCVSITG
RVKDNFKTSKGKYVAPVPIERKLAQDPHIELLCVIGSGLPHPIALVQLSEGAYLQPREEV
RSSLKATLDSINPNLESHETVDAIIVVKDAWDVDNDVLTPTLKIKRHVLEKRFTDKIDGI
RGGKIRWEDEID
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggaatcacagatcaaaacacctgtagagatgctcgaccattgggtcgacaccctaggt
gactcgacctacctgagacaaccgatcaatggtcagtaccaagattttagttggcgtgaa
gtacaacaaaaaatgcagcagcttgccggcgcgatgagacatttgggtctaaagcctggc
gataaagtcgccgtgctctctaaaaactgtgccgaatggtttattaccgatcttgccctg
atgcatggcggctatattagtgtgcccatttacccaacggccaacgcggataccatacgt
tacgtgttggagcacagtgaagccaaggccattattatcggtaagctagattattgggcc
gatcaagaagccggagttggcggcgatctcttaagaatggccatgccctacgacactatg
ccagctcaatacaaatgggaaagcttactgcaacttggtgagcccttactcgatgcccct
tttgccaccccagagcaaataatgacactgatctacacttcaggctccacaggcaagcct
aagggtgccattcagactttcgccagctatgcctggacttgtaaggctgtggtaagggat
cttaaaactggtgtcaacgacagattaatctcttacctgcctcttgcccacattactgag
cgcgtggcaatggaaggctcttctttctactctggtagcagtgttgccttcgtcgagagc
ctggatagcttcgttaccgatgttcaacgtgccaggccaacggtatttttctccgtcccc
agactctggagcctattccagcaaaatattatcggcaagatcggcaacagtaagctgaac
ttcctgctgaaattgcctatcatcaacggcatcattaagaagaagatccattcaggccta
ggtttggagcattgtcgcctgctgggatcgggctccgcgccaattcccccttcacttatt
cagtggtatcacagcataggcctcaatatcagtgaagcttggggcatgacagaaaacagt
gcctactccatcatcaactatccattcgatgccagtaaaataggcacagtcggccgcgcc
gtcgaaggttgcctaatcaagcaaaccgacagcggtgagctcttggtaaaaagcccgggc
ttgatgacaggttactataagcaagatgagctgagcgccacctcattcgatgaagaaggc
tacttcctcaccggagacctctgctccatcgacggcgatggttgcgtatcaataaccggt
agggtcaaggataactttaagacttcgaaaggtaagtatgttgcccccgtacccatcgag
cgtaaattggcacaagatcctcatattgagctactgtgtgtcatcggttcagggctcccc
caccccattgctttggtgcaactatctgaaggcgcttacctgcagccaagagaagaggtt
cgtagctcactaaaggcaacgctagatagcatcaaccccaaccttgaatcccatgaaaca
gttgatgccatcatagtcgtcaaggacgcttgggatgtcgataatgatgtactgactccg
acactgaaaattaaacgtcatgtgctggaaaaaagattcactgacaagatcgacggcata
cgtggcggcaagatacgttgggaagatgaaatagactag
DBGET
integrated database retrieval system
