Shewanella psychrophila: Sps_03637
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Entry
Sps_03637 CDS
T05063
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sps_03637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_03637
03400 DNA repair and recombination proteins [BR:
spsw03400
]
Sps_03637
Enzymes [BR:
spsw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Sps_03637
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sps_03637
DNA repair and recombination proteins [BR:
spsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sps_03637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AQS38764
UniProt:
A0A1S6HTG1
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All DBs
Position
complement(4167456..4168988)
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AA seq
510 aa
AA seq
DB search
MSNVLPQLSNESCRKARLSRDPRFDGKFFIGVLTTGIFCRPICPAVAPKEENVRYFDSAV
SASSAGLRPCLRCRPDSAPDSNAWKGTRTTLERALALIEGGVLSGSDGVGIEVLSDRLGI
SSRYLRQLFSDNFGTSPKKYAQFRDLMFAKQLLHQTNLSVTQIAFASGFNSVRRFNESFK
HTLKLTPTALRKTNQKSAEVGKGNDKLELITDGVMLSLFFTYRPPLNWTRQMAFYRQRMV
ANMEWEVCGDGYGRSFQFGETKGYFEAIHRVEKNGFKINIYLASSDHLASLKDITMQIRR
LLDLDADMDKIETVLGSTAIMTHNMIRGLRLPGTWSVFEAGCRAVLGQQVSIIQATKLLN
TLVKAYGENVTISGKQVVLFPTPTAIAEASLDELKMPGARKMALKALGKFVSENPDGYVD
TWLSIKGIGPWTLAYAKMRGLSDPDVLLCSDLVVKKKVLGLYQQGIENVTQDEQADDCSI
RLDYSELTNTLTEQVSPWGSYLTFQLWNLA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgtcttgccccagttatccaacgaatcttgtagaaaagccaggttgtcccgt
gatccacgtttcgacgggaaattttttatcggggtgcttacaaccggtatcttctgtcgg
ccaatttgtcctgctgtggcgccgaaggaggagaatgttcgctattttgattcagctgtc
agtgcgtctagtgcagggctaagaccttgtctgcgttgccggcccgacagcgcacctgat
tccaatgcttggaaaggtactcgcacgacgttagagcgggcacttgccctgatagagggg
ggcgtgctttctggaagtgatggggtaggcattgaagtattatctgacaggttgggcatt
tccagccgctatctcaggcagctttttagtgacaactttggtacgtctcctaaaaagtat
gcccaatttcgtgatttaatgttcgctaagcagcttctgcatcagacgaatttaagtgtc
actcagattgcgtttgcatcagggtttaacagtgtcaggcgatttaatgagtcatttaaa
catacgttaaaactcacgcctaccgccttgagaaaaacgaatcagaaaagtgctgaggtt
gggaaggggaatgacaagcttgaattaataacagatggtgtgatgctgtccctgtttttc
acctataggccgccattgaactggactcgtcagatggcattttatcgacagcgtatggtc
gcgaatatggagtgggaagtatgcggggatggttatgggagaagcttccagtttggtgaa
acgaaagggtattttgaggcaattcatcgagtagaaaaaaatggatttaagatcaatatt
tatctggcctctagtgatcacctcgctagtttaaaagatattaccatgcagatccgtagg
ctgttagatctggatgcagatatggacaagattgaaactgttttaggttcgacagctatt
atgactcacaatatgatccgtgggttaaggttacccggcacctggtctgtttttgaagcg
ggttgtcgtgctgtactgggtcagcaggtgagtattatacaagctactaaactgttaaac
actctggttaaagcctatggtgagaatgtgactatttcaggtaagcaagttgtccttttt
cctacgccaacagcaattgctgaagcctcactcgatgagctcaaaatgcctggagcgagg
aaaatggcgctaaaagcattagggaaatttgtgagtgagaatcctgatggctatgtcgat
acctggttatctatcaaaggtataggtccctggacgcttgcctatgccaagatgcgtggc
ctaagtgacccggatgtcctattgtgttccgatctagtggttaagaaaaaggtattaggc
ctgtatcaacaaggcatagaaaacgttactcaggatgagcaagcagacgactgctcaatt
cgactcgattatagtgagctaaccaacacgctcaccgagcaagtgtctccctggggcagc
tatttaacttttcaattatggaacttagcatga
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