Shewanella psychrophila: Sps_03909
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Entry
Sps_03909 CDS
T05063
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00730
Thiamine metabolism
spsw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Sps_03909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsw03009
]
Sps_03909
Enzymes [BR:
spsw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Sps_03909
Ribosome biogenesis [BR:
spsw03009
]
Prokaryotic type
GTPases
Sps_03909
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AIG1
Dynamin_N
Septin
FeoB_N
AAA_29
MeaB
nSTAND1
AAA_33
ATP-synt_ab
AAA_22
NACHT
AAA_16
AAA_24
IIGP
AAA_25
DUF87
Motif
Other DBs
NCBI-ProteinID:
AQS39024
UniProt:
A0A1S6HU55
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All DBs
Position
4466791..4467939
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AA seq
382 aa
AA seq
DB search
MKKHHKFSIIKSTSNSTSSPSADSSASRAANFITNRDQSSESLTRLGWRSFFAQQVAGEN
ITELKFAKVMACHRNQFELETSTNTLTLPITNQMADITIGDWLVLNDDNSFRQRLERLSL
FSRKAPGSKVQTQLIAANVDTVFIVSSLNKDFNLSRIERYLALANEAEVTPVFVLTKADL
CDDTQVYIKQILGIAPLAMVETVNALARESVQPLYAYCALGQTVAVMGSSGVGKSTLINS
LIGAQAQLTSNIREDDSKGRHTTTGRTLHQLNSGGLLLDTPGMRELQLADCEQGVADTFE
EIISLARQCRFADCHHQSEPGCAVQTALTNGELEYRRLASYQKLLREQALNTASLAQKRA
KDRNLTKFHRSIQDGARRLKGK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaccataaattctcaataataaaatctacatcaaactcaacttctagccca
agtgctgactcaagtgcgagtagagctgccaacttcataacaaatcgagaccagtcaagt
gagtcactcactcgattaggttggcgttctttttttgcgcaacaagttgctggagaaaac
atcactgaactaaagttcgctaaagtgatggcctgtcaccgaaaccaattcgagctggaa
acaagtacaaacaccttaacgctcccaatcacaaaccagatggcagatattactatcgga
gactggttagtgcttaatgatgacaacagttttcggcaacgccttgaacgtctctcatta
tttagccgcaaggctccgggaagcaaggttcagactcagctcattgcggccaatgtcgat
acggtatttatcgtctcatccttgaacaaggacttcaatttaagccgtatagaacgctat
ctcgccttagccaatgaagccgaagtcaccccagtatttgtcctcactaaagccgatctt
tgcgatgatactcaagtttacattaagcaaatattgggtatcgctccgctggctatggta
gagacagtcaatgcactagcgcgagaaagtgtacaacctctgtatgcttattgcgctcta
ggacagacagtggcagttatgggctcatctggagttggaaaatcaacactgatcaatagc
ttgatcggggctcaggcacagttaacctcaaatattcgagaagatgatagcaaggggcgt
cacacaacaacggggcgcacactacatcaactgaattctggaggcctgctcttagataca
ccgggtatgcgggaattacaacttgctgattgtgagcaaggcgtcgctgacacctttgaa
gaaataatctctttagcacggcaatgcaggtttgctgattgtcatcaccaatcagagcct
ggatgtgcggtgcaaacggcgttaaccaatggagagctagaatatcgccgtttagccagc
taccaaaagttactccgggagcaggcattaaatacggcgagtttagcccaaaagcgcgct
aaagatcgtaacctaaccaagttccatcgctcgatacaagatggggccagaaggcttaag
ggaaagtaa
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