Shewanella psychrophila: Sps_03996
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Entry
Sps_03996 CDS
T05063
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_03996
Transporters [BR:
spsw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sps_03996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Peptidase_M16
Motif
Other DBs
NCBI-ProteinID:
AQS39111
UniProt:
A0A1S6HUE0
LinkDB
All DBs
Position
4561308..4564022
Genome browser
AA seq
904 aa
AA seq
DB search
MNRLNRIKVSYLSGLIALNLGMSANVNATEGSQAEANSDIEVIAVTGIRGSLIKSKDIKK
GSDSVVDAITSEDIGKFPDQNVAESLQRITGVSIDRSGGEGQSITVRGLGPEFNTTLINK
RTMATTSGGRSFNFDILASELISGAEVYKTQSANLQEGAIGATVNITTFKPLAIPGFKAT
GSVKAVYDEMSGTTSPQFSGLISNTFDDEKFGVLLSLAHSQRDSRYDEANTAYYERTDLT
LNDGRTFDDVYMPQNYDQIAQTESRERTGGNLVFQYAPMDNLTFTLDALYSKYDVDYRQD
ILAHWFEENKLTDVTLDNNRTVVQLSMGNGSHSDFMVRQSQTENQLKAFGFNADWDLNDT
INLAADISYSQASSDPLAGMTDTVAARPGDYSYDRSSGALRPSIIFNTNNSSNGLTAGWG
DRSGTQIDDEVLEVKLDGEWIVDSGALATINFGVLYSDRTFGSTDYSTKWPVPVIWGDNS
SPVYLDPNLFSHFDADGFLSGGDGASAQNWLTFNSEAWFDYVTSDEVMAQLDDPAASHAL
LDQYGTQMYASPTAYEVNETLNALYADFHFDGYLYDMPWKVVTGIRYVETTSKSKGNQIA
LLDLVSAPNEDGVVRAVESEDYLPVEASNSYDNWLPSLNANIEVIEDFIVRVAYSKSITR
PELDEMSPLSSYSGGHLNSLKGKGANPLLMPFTSNNYDLSLEWYYQEGSYASVAAFRKDI
SGYLETEEIQEVVSVPSGDYDYKMTRPVNQNDAQITGYEFAIQHMFTSLPEPLDRLGFIA
NMTIVDSDSSSSTSGDPLPLVGLGDSQNLILFYEKDAVQFRIAYNNRSRFMQSKPLSWRG
AHYVEDYAQVDISGSYDFNENLTLFIEGINITNELTVKTAEYSNQVLKVTETGPRYSLGI
RGVF
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaacagactaaatcggataaaggttagttatttatcaggattgatagcactcaaccta
gggatgtcagcgaatgttaatgccacagaaggttcacaggcagaagccaattctgacata
gaagtaatcgcagttaccgggatcagagggagtctgataaagtccaaggatatcaagaaa
ggatctgacagtgttgtcgatgcgatcacctcggaagatataggtaaattccccgatcaa
aacgtcgccgaatcactacaaagaatcaccggcgtatccatcgacagatccggtggcgaa
ggccagtcgatcacagtcagaggactcgggcctgagtttaataccaccctgataaacaag
agaaccatggcgacgaccagtggtggacgttcttttaacttcgatattttagcttctgaa
ctcatcagcggcgccgaggtatataagactcagtcggctaacctacaggaaggcgctatc
ggtgcaacggtcaatatcaccacctttaaacctttagccattcccggatttaaggccacg
ggcagtgttaaagccgtgtatgacgagatgagcggcactaccagcccacaattctcaggg
ctcatcagtaatacttttgatgatgagaagttcggtgtgctgttatccttggctcatagt
caaagagacagccgctacgatgaagccaataccgcttattacgaacgaaccgatctaaca
ctaaacgacgggcgcacgtttgatgatgtctatatgccgcagaattatgatcaaatagcg
caaactgagtcccgtgagcgcacaggaggtaatctggtatttcaatacgcgcccatggat
aacctgaccttcacgctcgatgcactctattcaaagtatgatgtcgattacaggcaagat
atcctcgcccattggttcgaagagaataagctcaccgatgtcactctggataacaaccgc
actgtggtacagctgtccatgggtaatggcagtcacagtgatttcatggtgcgacaatcg
caaacagagaaccagctaaaggcctttggttttaatgcggactgggacttaaatgacact
atcaacttagccgccgacatttcatactcccaggcctcttcggatccattagctggcatg
actgataccgtcgccgcgcgccccggggattatagctacgacagaagctcaggtgcccta
cgaccttcaatcatcttcaataccaataactcatccaatggcttaacagcaggttggggc
gatagatctggtacccaaatcgatgatgaagtcttagaagttaaactcgatggtgaatgg
atagtcgatagtggtgcattggcaacaattaacttcggtgtgctctactcagacagaacc
ttcggcagcacagactatagtacaaaatggccggtacctgtcatatggggtgataacagc
tcacctgtttatttagatccaaatctgttcagtcatttcgatgccgatggcttcttatcc
ggaggcgacggtgcatcggctcaaaactggctcacatttaactctgaggcctggttcgac
tacgtcacatccgatgaagtgatggcgcagctcgacgaccctgcagcaagccatgcttta
ctggaccaatacggtacacagatgtatgcctcaccgacggcctatgaagtcaatgaaacg
ctcaatgccttgtacgccgattttcatttcgacggctacctctatgacatgccatggaaa
gtcgttacaggcatacgttacgtagaaacgaccagtaaatctaaaggaaatcagatcgcg
ttactagatctggtgtctgcgcctaatgaagacggagtcgtacgtgcagtagaatctgaa
gattacttacccgtagaagcaagcaatagttacgataactggctacctagcctaaatgcc
aatatcgaagtgatcgaggattttatcgtgcgcgtggcgtattctaagagcatcacccgt
cccgaactcgatgagatgtcgcccctgtctagctatagcggtggacaccttaatagctta
aagggcaaaggcgctaaccccttgttgatgccattcaccagtaataactatgatctctct
ctagagtggtattaccaggagggcagttatgcgtctgtagccgcctttaggaaagatatc
tctggatatttggaaaccgaagaaatacaggaagtggtgagcgttcccagtggcgattac
gactataaaatgacccgtccagtaaaccagaatgatgctcagataacgggttacgagttt
gccatacagcacatgtttaccagcctgccagagcctctagatagattaggttttatcgct
aacatgaccatagtcgatagcgattcgagttcttcaacctctggagatcccctgcctttg
gttggccttggtgattcacagaacttgatcttattctatgagaaagacgcggttcaattc
cgtatcgcctacaacaatcgctcgagattcatgcagtctaagcctttgtcatggcgcggc
gcccattatgtagaagattatgcccaggtggatatcagcggtagctatgatttcaacgaa
aacttaaccctatttatagaagggatcaatattaccaatgagttaaccgtgaagacggct
gaatactcgaatcaggtattaaaagtcacagaaaccggcccaagatattcattaggcatt
agaggagtattctag
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