KEGG   Shewanella psychrophila: Sps_03996
Entry
Sps_03996         CDS       T05063                                 
Name
(GenBank) TonB-dependent receptor
  KO
K02014  iron complex outermembrane recepter protein
Organism
spsw  Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:spsw02000]
    Sps_03996
Transporters [BR:spsw02000]
 Other transporters
  Pores ion channels [TC:1]
   Sps_03996
SSDB
Motif
Pfam: TonB_dep_Rec_b-barrel Plug Peptidase_M16
Other DBs
NCBI-ProteinID: AQS39111
UniProt: A0A1S6HUE0
LinkDB
Position
4561308..4564022
AA seq 904 aa
MNRLNRIKVSYLSGLIALNLGMSANVNATEGSQAEANSDIEVIAVTGIRGSLIKSKDIKK
GSDSVVDAITSEDIGKFPDQNVAESLQRITGVSIDRSGGEGQSITVRGLGPEFNTTLINK
RTMATTSGGRSFNFDILASELISGAEVYKTQSANLQEGAIGATVNITTFKPLAIPGFKAT
GSVKAVYDEMSGTTSPQFSGLISNTFDDEKFGVLLSLAHSQRDSRYDEANTAYYERTDLT
LNDGRTFDDVYMPQNYDQIAQTESRERTGGNLVFQYAPMDNLTFTLDALYSKYDVDYRQD
ILAHWFEENKLTDVTLDNNRTVVQLSMGNGSHSDFMVRQSQTENQLKAFGFNADWDLNDT
INLAADISYSQASSDPLAGMTDTVAARPGDYSYDRSSGALRPSIIFNTNNSSNGLTAGWG
DRSGTQIDDEVLEVKLDGEWIVDSGALATINFGVLYSDRTFGSTDYSTKWPVPVIWGDNS
SPVYLDPNLFSHFDADGFLSGGDGASAQNWLTFNSEAWFDYVTSDEVMAQLDDPAASHAL
LDQYGTQMYASPTAYEVNETLNALYADFHFDGYLYDMPWKVVTGIRYVETTSKSKGNQIA
LLDLVSAPNEDGVVRAVESEDYLPVEASNSYDNWLPSLNANIEVIEDFIVRVAYSKSITR
PELDEMSPLSSYSGGHLNSLKGKGANPLLMPFTSNNYDLSLEWYYQEGSYASVAAFRKDI
SGYLETEEIQEVVSVPSGDYDYKMTRPVNQNDAQITGYEFAIQHMFTSLPEPLDRLGFIA
NMTIVDSDSSSSTSGDPLPLVGLGDSQNLILFYEKDAVQFRIAYNNRSRFMQSKPLSWRG
AHYVEDYAQVDISGSYDFNENLTLFIEGINITNELTVKTAEYSNQVLKVTETGPRYSLGI
RGVF
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgaacagactaaatcggataaaggttagttatttatcaggattgatagcactcaaccta
gggatgtcagcgaatgttaatgccacagaaggttcacaggcagaagccaattctgacata
gaagtaatcgcagttaccgggatcagagggagtctgataaagtccaaggatatcaagaaa
ggatctgacagtgttgtcgatgcgatcacctcggaagatataggtaaattccccgatcaa
aacgtcgccgaatcactacaaagaatcaccggcgtatccatcgacagatccggtggcgaa
ggccagtcgatcacagtcagaggactcgggcctgagtttaataccaccctgataaacaag
agaaccatggcgacgaccagtggtggacgttcttttaacttcgatattttagcttctgaa
ctcatcagcggcgccgaggtatataagactcagtcggctaacctacaggaaggcgctatc
ggtgcaacggtcaatatcaccacctttaaacctttagccattcccggatttaaggccacg
ggcagtgttaaagccgtgtatgacgagatgagcggcactaccagcccacaattctcaggg
ctcatcagtaatacttttgatgatgagaagttcggtgtgctgttatccttggctcatagt
caaagagacagccgctacgatgaagccaataccgcttattacgaacgaaccgatctaaca
ctaaacgacgggcgcacgtttgatgatgtctatatgccgcagaattatgatcaaatagcg
caaactgagtcccgtgagcgcacaggaggtaatctggtatttcaatacgcgcccatggat
aacctgaccttcacgctcgatgcactctattcaaagtatgatgtcgattacaggcaagat
atcctcgcccattggttcgaagagaataagctcaccgatgtcactctggataacaaccgc
actgtggtacagctgtccatgggtaatggcagtcacagtgatttcatggtgcgacaatcg
caaacagagaaccagctaaaggcctttggttttaatgcggactgggacttaaatgacact
atcaacttagccgccgacatttcatactcccaggcctcttcggatccattagctggcatg
actgataccgtcgccgcgcgccccggggattatagctacgacagaagctcaggtgcccta
cgaccttcaatcatcttcaataccaataactcatccaatggcttaacagcaggttggggc
gatagatctggtacccaaatcgatgatgaagtcttagaagttaaactcgatggtgaatgg
atagtcgatagtggtgcattggcaacaattaacttcggtgtgctctactcagacagaacc
ttcggcagcacagactatagtacaaaatggccggtacctgtcatatggggtgataacagc
tcacctgtttatttagatccaaatctgttcagtcatttcgatgccgatggcttcttatcc
ggaggcgacggtgcatcggctcaaaactggctcacatttaactctgaggcctggttcgac
tacgtcacatccgatgaagtgatggcgcagctcgacgaccctgcagcaagccatgcttta
ctggaccaatacggtacacagatgtatgcctcaccgacggcctatgaagtcaatgaaacg
ctcaatgccttgtacgccgattttcatttcgacggctacctctatgacatgccatggaaa
gtcgttacaggcatacgttacgtagaaacgaccagtaaatctaaaggaaatcagatcgcg
ttactagatctggtgtctgcgcctaatgaagacggagtcgtacgtgcagtagaatctgaa
gattacttacccgtagaagcaagcaatagttacgataactggctacctagcctaaatgcc
aatatcgaagtgatcgaggattttatcgtgcgcgtggcgtattctaagagcatcacccgt
cccgaactcgatgagatgtcgcccctgtctagctatagcggtggacaccttaatagctta
aagggcaaaggcgctaaccccttgttgatgccattcaccagtaataactatgatctctct
ctagagtggtattaccaggagggcagttatgcgtctgtagccgcctttaggaaagatatc
tctggatatttggaaaccgaagaaatacaggaagtggtgagcgttcccagtggcgattac
gactataaaatgacccgtccagtaaaccagaatgatgctcagataacgggttacgagttt
gccatacagcacatgtttaccagcctgccagagcctctagatagattaggttttatcgct
aacatgaccatagtcgatagcgattcgagttcttcaacctctggagatcccctgcctttg
gttggccttggtgattcacagaacttgatcttattctatgagaaagacgcggttcaattc
cgtatcgcctacaacaatcgctcgagattcatgcagtctaagcctttgtcatggcgcggc
gcccattatgtagaagattatgcccaggtggatatcagcggtagctatgatttcaacgaa
aacttaaccctatttatagaagggatcaatattaccaatgagttaaccgtgaagacggct
gaatactcgaatcaggtattaaaagtcacagaaaccggcccaagatattcattaggcatt
agaggagtattctag

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