Shewanella psychrophila: Sps_04100
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Entry
Sps_04100 CDS
T05063
Name
(GenBank) metalloendopeptidase-like membrane protein
KO
K06194
lipoprotein NlpD
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Sps_04100
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AQS39206
UniProt:
A0A1S6HUG8
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All DBs
Position
complement(4659661..4660635)
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AA seq
324 aa
AA seq
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MFFRCLFGLQQLGCSLLGAFLITGLKVNCNNLLLLAVFIGLVGCSFRSDRPAPVVNVTTP
VMATYNKGSLKSDSYLVKKGDTLYSIAWVSNNDFIDLARKNKLKKPYTIYPGQKLNLNLT
STVTNSQKAKTVPNNPPKVVSTKTKATKKQTDTPVVVVRNNQKPPKNKPLDPVKESAYSV
TTGQQDINKSIHRQTTQLPTKVSKWFWPVRGKLIGKFSASEQGNKGIKIAGNRGDIIKSA
ADGRVVYAGSALRGYGNLVIIKHSDDYLSAYAHADKILVKEKQFVSVGQTLAKMGNTGTD
RVMLHFEIRYHGKSVDPLKYLPKQ
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgttttttagatgtttatttggtttacagcagcttggctgttcattgttgggggcattc
ttgattacagggttaaaggtgaattgtaataacctacttctattagcggtatttatcggc
ttagtaggttgtagttttcggtcagatagacccgctcctgtggtaaatgtcacgactcca
gtgatggctacttataataaaggctcattaaaatctgattcttatctcgttaagaaaggt
gacactctctattccattgcctgggtatctaacaatgatttcattgatttagctaggaaa
aataagcttaaaaagccatatactatctaccctggacagaagctaaaccttaatttgaca
tctactgttacaaatagccaaaaggctaaaacggtgccaaataatccccctaaagtagta
tcaaccaagactaaagcgactaaaaaacaaacggatacacctgttgttgtggtcaggaac
aaccaaaaaccgcctaaaaataaaccacttgatccggtcaaagagtctgcgtattctgta
acgactggtcaacaagatattaacaagtctatccacaggcagacgactcagcttccaact
aaagtaagtaagtggttctggcctgtgagaggtaagttgattggtaaattctctgcgagt
gagcaagggaataaagggattaagattgctggtaaccggggcgacattatcaagtctgca
gccgatggccgtgtggtttatgcaggcagtgcccttagagggtatggaaatttagtcatt
attaaacacagtgacgattacttaagtgcttatgcgcatgccgataagatcttagttaaa
gaaaaacagtttgtctcagtgggacaaacacttgcaaaaatgggtaatacgggtaccgat
cgggtcatgttacattttgagattcgataccacgggaagtctgttgacccacttaaatat
ttacctaaacaatag
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