Shewanella psychrophila: Sps_04127
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Entry
Sps_04127 CDS
T05063
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00260
Glycine, serine and threonine metabolism
spsw00460
Cyanoamino acid metabolism
spsw00630
Glyoxylate and dicarboxylate metabolism
spsw00670
One carbon pool by folate
spsw00680
Methane metabolism
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01120
Microbial metabolism in diverse environments
spsw01200
Carbon metabolism
spsw01230
Biosynthesis of amino acids
spsw01240
Biosynthesis of cofactors
spsw04981
Folate transport and metabolism
Module
spsw_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sps_04127
09102 Energy metabolism
00680 Methane metabolism
Sps_04127
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sps_04127
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Sps_04127
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Sps_04127
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Sps_04127
Enzymes [BR:
spsw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Sps_04127
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Cys_Met_Meta_PP
Chlorosome_CsmC
Motif
Other DBs
NCBI-ProteinID:
AQS39233
UniProt:
A0A1S6HUK4
LinkDB
All DBs
Position
complement(4687739..4688995)
Genome browser
AA seq
418 aa
AA seq
DB search
MLKKDMNIADFDPQLFKAIEDETRRQEEHIELIASENYTSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEDLAISRAKELFGATYANVQPHSGSQANAAVFMALLQGGDTVLGMS
LAHGGHLTHGSHVSFSGKLYNAVQYGIDETTGKIDYAEVERLAIEHKPKMIIAGFSAYSG
IIDWSKFREIADKVGAYLFVDMAHVAGLIAAGIYPNPLPHAHVVTTTTHKTLAGPRGGLI
LSAIDDEAIYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEALEPEFTVYQKQVVVNAKAMA
KTFIERGYDVVSGGTDNHLFLLDLISKDMTGKDADAALGLANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFKEAQSVELTNWMCDVLDDITNEGTIERVKNQVLDLCAKFPVYG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcggacttcgatccacaactgtttaaagcgattgaa
gatgagactcgccgccaggaagagcatatcgaacttatcgcttcagaaaactacaccagt
cctcgtgttcttgaagcacaaggttctcagctaaccaacaagtacgccgaaggttaccct
ggtaagcgttactatggtggttgtgagtatgtagatatcgcagaagacttggctatctct
cgtgctaaagaactgtttggtgcgacttatgccaacgtgcagccacattctggttcacag
gcaaatgctgcagtatttatggctctgcttcaaggcggcgacacagtgctgggcatgagc
ctggctcacggtggtcatctgactcacggttcacacgttagcttctccggtaagctttat
aatgcggttcagtacggaatcgatgagactacgggtaagatagattacgccgaagttgag
cgccttgccattgagcacaagcctaagatgatcatcgcaggtttcagtgcttattcaggc
atcatcgattggagcaagttccgtgagattgccgataaagtcggtgcttacctgttcgtc
gatatggcacacgttgccggtcttatcgctgcgggcatctacccgaatccacttccacat
gcccacgttgtaactacaacgacccataagactctagctggcccacgtggtggtttgatt
ctttcggctatcgatgatgaagctatctataagaagctaaactctgcggtattcccaggt
ggtcaaggtggtcctttgatgcacgttatcgctgctaaagcggttgcatttaaagaagca
ctagagcctgaattcacagtttatcagaagcaagttgttgttaacgcaaaggctatggct
aaaactttcatcgagcgtggctatgatgtggtttctggtggtactgataaccatctattc
ttgctggacttgatcagcaaagatatgacaggtaaagatgccgacgctgcactgggtctt
gctaacatcacagtgaacaagaactcggtaccgaatgacccacgctcaccatttgtgact
tcaggtctgcgtataggttctccggccatcactcgccgtggcttcaaagaagcgcaatcg
gttgagctaactaactggatgtgtgatgtgctggatgacatcactaatgaaggcactatc
gaacgtgttaaaaatcaggttctggatctgtgtgctaagttccctgtttacggttaa
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