Shewanella psychrophila: Sps_04227
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Entry
Sps_04227 CDS
T05063
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsw03400
]
Sps_04227
DNA repair and recombination proteins [BR:
spsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sps_04227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
SLFN-g3_helicase
nSTAND3
Rad51
AAA_18
NPHP3_N
cobW
AAA_14
DUF7125
CobU
AAA_19
ABC_tran
AAA_30
NACHT
AAA
AAA_11
AAA_16
MMR_HSR1
AAA_24
AAA_28
TsaE
Motif
Other DBs
NCBI-ProteinID:
AQS39333
UniProt:
A0A1S6HUV5
LinkDB
All DBs
Position
complement(4808159..4809532)
Genome browser
AA seq
457 aa
AA seq
DB search
MAKNKTAFVCNECGQDFPRWQGQCSACNEWNTITEVRLGASKSAGSSVSGYAGSVGGGSK
KLKEIREVEAEKMLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTLLSDLVSRMSQLMP
SLYCTAEESLSQFKNRVNRLKLSCHEDNLYLMAETSVEAIIAELDAKQIKFAVIDSIQAV
VTDLANGSPGSPSQVKSSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH
LECNDGQIRTLRANKNRFGDVDTVGIFKMTERGMLSVDNPSEIFLSGSTTESPGAAITCI
RKGNRNLLLEIQCLTTETEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKIFHDTYFNLVG
GLKIDESETCIDLALVTALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQH
GFTEIFIPYRNYHKSMEGLGAKINPVKTIHDFLELIN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataaaacagcatttgtatgtaatgagtgtggtcaagactttccacgttgg
cagggacagtgtagcgcctgtaatgagtggaataccattacagaagttcgcttaggggca
agtaagtcggcggggtcttccgtatctggctatgcgggttctgttggcggcggctcaaag
aagctcaaagaaataagagaagtcgaagccgagaagatgcttacaggcattggagagcta
gaccgcgttctgtgtggtggtttaaccacaggctctgtgaatattatttctggcgatccc
ggagcgggcaagacaaccttgttatcagacttggtgtcccgtatgtctcagctgatgccg
tcgctatactgtaccgccgaagagtcgttgtcacagtttaagaatcgtgtgaatcgtctc
aagttaagctgtcatgaagacaatctgtacctgatggcggaaaccagcgttgaagccatc
attgctgagctcgatgctaagcagattaagtttgctgtcatcgactcgattcaagcggtt
gtcacagatttagccaacggtagtcccggctccccctctcaggtaaagagtagtgctcag
gccctgacacaatactgtaagcaaaataacgtcaccatgttcctcgtggcccacgtaaat
aaaaataatgaaactgccgggccccagacactgatccatatcgtagattgtctcacgcat
ctcgaatgtaacgatggtcaaattcgtacccttagagccaataagaaccgtttcggtgat
gtagataccgtaggtatcttcaagatgaccgaacggggcatgctcagtgttgataacccc
agcgaaatcttcctatcgggatcgacgacagaatctcctggagcggcgatcacctgcatc
cgtaaaggtaaccgtaatttattgctcgagatccagtgcttaaccacggaaacagaaggt
gagtttccgcagcgagtctgtgttggccttaatatgaaccgcattaagatgctgactggc
atattgcgtaaacatacgcggactaagatttttcatgatacctatttcaacttagtcggt
ggcctgaagatcgacgaatcagaaacctgtatcgacttagcattagtcactgcattactg
agcagcttgaatgattttgtggtgcccagaacgacctgcatcatgggagaacttagctta
aatggagatgtgcgtcccatagatagcggtgtacctagagtgaaagaagcggttcagcat
ggttttactgagatttttattccctatcgtaactatcataagtcgatggaagggctaggg
gctaagatcaatccggtgaagactattcatgattttcttgagttaataaattaa
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