KEGG   Shewanella psychrophila: Sps_04245
Entry
Sps_04245         CDS       T05063                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
spsw  Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spsw03016]
    Sps_04245
Enzymes [BR:spsw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Sps_04245
Transfer RNA biogenesis [BR:spsw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Sps_04245
 Prokaryotic type
    Sps_04245
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: AQS39350
UniProt: A0A1S6HUW7
LinkDB
Position
complement(4832198..4833160)
AA seq 320 aa
MGRRQRGRFIDGILLLDKETGMSSNFALQRVKRLFDANKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGVRTDTSDSDGEVVQTRPLDFTQDLLMESLEYFRGDTMQ
VPSMYSALKHKGQPLYKYAREGIEVPREARPITVFELNFISLEGDELTLDIHCSKGTYIR
TITDDLGEMLGCGAHVIMLRRTQVADYPYDRIVSLTQLNEMVEKAEAQDLDAKAILDELL
LPMDTAVSKFQEINLADTVAPYLMNGNPVQNPGSCELADGELVRITIGEEHKFVGIGAIN
DDGLLAPKRLIVLREPLETA
NT seq 963 nt   +upstreamnt  +downstreamnt
atgggacgtcgtcagcgcggtcgcttcatcgatgggatcctgctcttggacaaagagact
gggatgagttcgaactttgctctgcaaagggttaagcgacttttcgatgccaataaagcg
ggccatactggcgccttagatcctttagccacaggtatgttacccatatgcctaggtgaa
gctaccaagttttctcagcatcttctcgatgctgataagcgctatttggtcacggctaaa
cttggtgtgcgcaccgatacaagtgattctgatggtgaagtggtacagacccgccctctg
gattttacccaagacttactgatggagtctttggagtattttcgtggcgataccatgcag
gtgccttcgatgtattcggcgctaaagcataagggacagcccctgtacaaatatgcccga
gaaggcatcgaagtacccagagaagctagacctatcacggtattcgaactgaattttatc
tctttagaaggggatgagctgaccttagacatacattgttctaagggaacctacattcgt
accattacagatgatctcggtgaaatgttggggtgtggtgctcatgtgatcatgctcaga
cgcactcaagtcgctgactacccttatgatcgcattgtaagtttaactcagttaaatgag
atggttgaaaaagctgaagcccaagatctagatgcgaaagctattctagatgagctattg
ctgcctatggatacagctgtcagtaagtttcaagaaattaacttagctgacacagttgca
ccttatctaatgaacggtaatccagttcaaaacccaggtagctgtgagctagctgatgga
gagctggtacggatcactattggcgaagaacacaagtttgttggtataggtgcaatcaat
gatgacggtctgctggcacctaagcgactcatcgttcttagagaacccttagaaaccgct
tag

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