Shewanella psychrophila: Sps_04265
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Entry
Sps_04265 CDS
T05063
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00220
Arginine biosynthesis
spsw00240
Pyrimidine metabolism
spsw00250
Alanine, aspartate and glutamate metabolism
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01240
Biosynthesis of cofactors
Module
spsw_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Sps_04265
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Sps_04265
00220 Arginine biosynthesis
Sps_04265
Enzymes [BR:
spsw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Sps_04265
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AQS39368
UniProt:
A0A1S6HVB6
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Position
complement(4853614..4856832)
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AA seq
1072 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELESKGVLKEFNVDMIGATA
DAIDKAEDRSRFDKAMKAIGLECPRAGIAHTMEEAHAVQAEVGFPCIIRPSFTMGGSGGG
IAYNREEFVEICTLGLDLSPTSELLIDESLIGWKEYEMEVVRDRNDNCIIVCAIENFDAM
GVHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNDITGGNTPASFEPAIDYVVTKMP
RFNFEKFAGANDRLTTQMKSVGEVMSIGRTFQESLQKALRGLEVGKNGLDPIIDIEDADA
MQRIRHELKEPGADRIWYIADAFRAGLSLDDIFELTNVDPWFLVQIQDLINFETQVKDTG
MSGLNEVFLRQLKRKGFSDLRLSDLLGVSESELRKLRHKHGIYPVYKRVDTCAAEFSTDT
AYMYSTYEEECEANPSDRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFESVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVPI
IGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVESAIISAERIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNSSPVLLDRFLDNAIEIDIDAICDGETVVIGSIMEH
IEQAGVHSGDSGCSLPPYSLSEDVQNRMREQVGKLAMELGVIGLMNVQFAVKDDEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKSQNFTEEVIPPFFSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGIGDTFAEAYAKAQLGATAAVPKSGRALLSVRNSDKQRVADLA
SNLIALGYEIDATHGTAIILGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTTEGRQ
AIEDSRQLRRGALRYKVDYTTTLNAAFATCMAHAADDRSTVTSIQELHKRIK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaaaagtattcttattctgggtgcgggtccgatcgttatc
ggtcaggcatgtgagtttgattactccggtgcccaggcgtgtaaggcgctacgtgaagaa
ggttatcgagttattcttgttaactctaaccctgccacgatcatgacagatcccgagatg
gccgatgcaacatatatcgagcctattcattgggaagttgttcgtaacattatcgctaaa
gaacgccccgatgcgattctacctactatgggtggccagacggcgcttaactgtgctctg
gagctggaaagcaaaggcgtattgaaagaatttaatgtcgatatgatcggtgctactgcc
gatgctatcgataaagccgaagaccgtagccgttttgataaggcgatgaaggccattggt
cttgagtgtccacgtgcgggcatcgctcacacgatggaagaagctcatgcggttcaagct
gaagttggttttccttgtattattcgcccatcgtttaccatgggcggtagtggcggtggt
atcgcttataacagggaggagttcgtcgagatctgtacattgggtctagacctttctccg
accagtgagttgctaatcgatgagtctcttatcggttggaaagagtatgagatggaagtg
gtacgtgatcgcaacgataactgcatcatagtctgcgctatcgaaaacttcgacgccatg
ggtgttcataccggtgactcgatcactgtggctcctgcgcagactctgacagataaagag
tatcagttgatgcgtaatgcatcactggcggttctgcgtgagattggtgtcgagactggt
ggttctaacgtacagttcggtatcaatccaaaagatggacgtatggttattatcgagatg
aacccacgtgtttctcgatcttcggcattagcgtctaaggcaacaggtttccctattgcg
aaaattgcagcaaaacttgctgtaggtttcactctcgatgagcttaaaaacgatattact
ggtggtaatacacccgcttcgttcgagccagctatcgattatgtggttaccaagatgccg
cgcttcaacttcgaaaagtttgccggtgcaaatgaccgtctaacgactcagatgaagtcg
gttggtgaagtgatgtccattggccgtacgttccaggaatcactgcaaaaggccttacgt
ggtctggaagttggtaagaatggtctagatcccattatcgatatcgaagacgccgatgcg
atgcagcgaattcgccatgaactcaaagaacctggcgcagacagaatttggtatattgcc
gatgccttccgtgccggcctctctctcgatgatatcttcgagctgactaatgttgatcct
tggttcctggtacagatacaagatctgattaattttgagactcaggttaaagacactggc
atgtcgggcctgaatgaggtcttcttgcgccaacttaagcgtaaaggcttctccgattta
cgtctgtcagatttgcttggtgtcagtgagtcagaacttcgcaaactgcgtcataagcat
gggatttatcctgtctataagcgcgtcgatacttgcgccgccgagttctcaacggacacc
gcttacatgtactctacctatgaggaagagtgtgaggcgaacccatcagatcgtgacaag
atcatgatcttaggcggcggacctaacagaattggccaggggatcgagttcgattattgt
tgtgttcatgcggctctcgcattacgtgaagacggttatgagaccatcatggtcaactgt
aaccctgagactgtatcaactgattacgatacgtccgacagactctatttcgaatctgta
actctggaagatgtgctggagattgttcgcatcgagaagcctaagggcgttatcgtgcaa
tatggtggtcaaacaccgcttaagttagctcgtgagctcgaagcagccggtgtacctatt
ataggtacaagccctgatgcgattgaccgcgccgaagacagagagcgtttccagcaggcg
attcagcgtctggagatgaagcagcctgaaaatgataccgtgactacagtggaaagtgcc
attatctcggctgagcgtatcggttatccgttagttgtacgtccgtcttatgtactcggt
ggtcgtgcgatggaaatcgtctatgatgagcaagacctgcgtcgctattttaatgaagct
gtgagcgtgtcaaactcatctcctgtcttgcttgaccgtttcttagataatgccattgag
atcgatatcgatgctatctgtgatggtgagactgtggttatcggctctatcatggagcat
atcgagcaagccggcgtacactcaggtgactcaggttgttcattgcctccctatagtctt
agtgaagatgtgcagaaccgcatgcgtgaacaggttggcaagttggccatggagcttggg
gttattggcttgatgaatgtacagtttgccgtgaaggatgatgagatctatatgatcgaa
gttaaccctcgcgccgcacgtacagtgccatttgtgtctaaggcgaccggtgtaccttta
gctaagatagccgcccgtgttatggcgggtcaaagcctcaagtcgcaaaattttaccgag
gaagtgattccacctttcttctcggtgaaagaggtcgtgttgccgtttaacaagttcccg
ggtgtcgatcctttgcttggccctgagatgcgttctaccggtgaagtgatgggcataggt
gatactttcgccgaagcgtacgccaaagcgcaacttggtgccacggctgccgtgcctaaa
tccggtcgtgccttgctatcggttcgtaacagcgataagcaaagagttgcagatctggct
tcgaaccttattgctctgggatatgaaatcgatgctacccatggtacagcaattatctta
ggcgaggcggggattaatccacgtctggtcaacaaggtacatgaagggcgtccgcatatt
cttgaccgtatcaagaatggtgaatatacctatatcgttaacactaccgaagggcgtcaa
gcgattgaagattctcgccagcttagacgtggtgcattgcgatacaaggtggattacacc
acgactctgaatgctgcttttgcgacatgtatggcacatgctgccgatgacagaagtact
gtgacttcgatacaagagttgcataaacgcatcaagtaa
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