Shewanella psychrophila: Sps_04335
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Entry
Sps_04335 CDS
T05063
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00540
Lipopolysaccharide biosynthesis
spsw01100
Metabolic pathways
spsw01250
Biosynthesis of nucleotide sugars
Module
spsw_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Sps_04335
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spsw01005
]
Sps_04335
Enzymes [BR:
spsw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Sps_04335
Lipopolysaccharide biosynthesis proteins [BR:
spsw01005
]
Lipid A
Sps_04335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AQS39436
UniProt:
A0A1S6HV40
LinkDB
All DBs
Position
complement(4929726..4930574)
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AA seq
282 aa
AA seq
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MSNKVIGLGDIEIANDKPFVLFGGMNVLESRDLAMKIAEKYAEVTQKLGIPYVFKASFDK
ANRSSVNSYRGPGMEEGLKIFQEIKQTFNLPLITDVHEIHQCAPVAEVVDIIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDELILCERGSSFGYNNLVVD
MLGMDEMKQTGYPVIFDATHALQRPGGRTDSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLNQLENYLTQMKAVDDLVKSFDAIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaagtcataggtctaggtgatatcgagatcgccaacgataaaccttttgtg
ttatttggtggcatgaatgtgctcgagtctcgtgatttggcgatgaaaattgctgaaaaa
tatgccgaagtgacgcagaagttaggtattccttatgtttttaaagcttcatttgataag
gctaatcgctcgtcggtgaattcatatcgtggtccgggtatggaagaggggcttaagatc
ttccaggaaattaagcaaacctttaatctacctctgatcacagatgtgcatgagatacac
cagtgtgcaccagtggctgaagtggtcgatatcattcagctccccgcatttttggctcgt
caaactgatcttgtggtcgccatggcaaaaacgggcgccatcatcaatgtgaagaagcct
cagtttttagctcctcatgagatgcgtcatatcatcactaaattcaatgaagccggtaac
gatgaacttatcttgtgtgaacgtggctcaagtttcggttataacaacctagttgtcgat
atgcttggcatggatgagatgaagcaaacgggttaccctgttattttcgatgccacccat
gcgcttcaacgtcccggtggccgcactgattcggctggtggacgccgtgctcaagcaacc
gagcttgcacgtagtggtatggcattaggtttagctggtttgtttattgaagcacacccg
gatcctgataatgctaaatgtgatggaccatgtgcattaccgctgaatcaactagaaaac
tacctgactcagatgaaggctgtggatgacctcgttaagtctttcgatgcgattgatacc
agtaaatag
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