Shewanella psychrophila: Sps_04400
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Entry
Sps_04400 CDS
T05063
Name
(GenBank) Beta-barrel assembly machine subunit BamD
KO
K05807
outer membrane protein assembly factor BamD
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_04400
Transporters [BR:
spsw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sps_04400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfiO
TPR_18
TPR_6
TPR_14
TPR_2
TPR_17
ARM_TT21
TPR_19
TPR_16
FAS_I_H
CSPP1_C
Motif
Other DBs
NCBI-ProteinID:
AQS39487
UniProt:
A0A1S6HVA1
LinkDB
All DBs
Position
4989521..4990327
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AA seq
268 aa
AA seq
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MEKILTTTLKESKLSMHKFAKGAVLALFSIAITACSSSPDEELKANKTSPDVLYSQARTS
MELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTH
KDIDYVYYMRGLVNMQSDSYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSYPNSKYAPD
AAQRMQSLKNRLAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTPSTERALEIMADAY
SELGQEKLKDNVLTVMKANYPDNKKLTN
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatcttaactacaactttaaaagaatcgaaattaagtatgcataaatttgct
aaaggtgctgtattagccctattttcaatagccattacggcttgtagtagtagcccggat
gaagaacttaaggccaacaagacatcacctgatgtactgtactcccaagcgagaacctct
atggagcttggtaattacagtaaagcagttcgttctcttgaagcattagactcgcgctac
ccattcgggccgcacaagacccaagtgcaattagatctcatttacgcctattataaacta
gatgaccccgcttcgggaatcgcaaacatagatcgttttatcagactcaaccccacccat
aaagatatagattatgtctattatatgcgcggactggttaatatgcagtctgatagctat
atgttccatgatatgctcaatattgatagaacggatcgagatccaaaagttgctcaagat
gcatttaaagatttcgatcgtctgatcaaatcttacccaaacagtaaatatgctcccgat
gccgctcagcgcatgcaatctcttaaaaacagactggctaaatactcaattaatgttgcc
gagtattacatgaagatgaacgcctggagtgctgcggctatcagagctcaatctgtgatg
gaaacctatcctggcaccccatctacagagcgtgctttagagataatggccgatgcttac
agtgagctaggacaagaaaagctgaaagataatgtgcttactgtgatgaaggctaactat
ccagataataagaaactgaccaactga
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