Shewanella psychrophila: Sps_04578
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Entry
Sps_04578 CDS
T05063
Name
(GenBank) fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
spsw
Shewanella psychrophila
Pathway
spsw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sps_04578
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_04578
Transporters [BR:
spsw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Sps_04578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_16
ABC_ATPase
AAA_29
AAA_21
ATP-synt_ab
AAA_24
DUF815
nSTAND3
DUF87
AAA_15
AAA_5
DEAD
AAA_23
MMR_HSR1
AAA_10
TsaE
Roc
Motif
Other DBs
NCBI-ProteinID:
AQS39663
UniProt:
A0A1S6HVT1
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Position
complement(5193629..5195398)
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AA seq
589 aa
AA seq
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MRPSLYFDGPIDKLNFHVLKLIWPYLLEFKQRVILALLCLIIAKVASVSLPFILKSLVDG
LGAASPEQMLSVPIALVVAYGGLRLLNTLISEVRDTLFGRVTERAIRRLGLNVFEHLHRL
DLEFHLERRTGGLSRDIERGTSGINFLMRFMVFNIVPTILEIALVVGIFFYNYGIEFAAI
TLGAVLAYGLFSVLATEWRTEYVREAAKADSHSNTRAIDSLLNYETVKYFNNEAYEARRY
DEALEEWEQAKRKNRLSLFALNAGQALIISVAMTLMLGLAAQNVAQGTMTIGDFVLVNAF
MMQLFIPLNFLGFVYREIRGALANIERMFGLLKRVPLIQDKDNAKEVCQGSGELKFESVS
FSYNTRQILKDVSFTILPGQKVAIVGDSGAGKSTIVKLLFRFYDVEKGCISLDGVNINNL
TQDALRQAIAIVPQDTVLFNDSLLENIRYGRPNASDEEIFQAINMAHLSHFIEALPEGWN
TPVGERGLKLSGGEKQRVAIARAILKGSPLLVFDEATSSLDSQSEQAILNALKEVAKGHT
SLVIAHRLSTVVDADQILVLSQGQIVETGDHESLLGQNGLYSRLWNIQN
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccctccctctatttcgatggacctatagataagttgaattttcatgtgttgaag
ctgatctggccttatttattagagtttaaacaaagggtaattttggccttgttatgcttg
attatcgccaaagtcgccagtgtctcacttccctttatattaaagtctctggtggatggt
ttaggcgccgcatcacctgagcaaatgctcagcgttccaattgctttagttgttgcctat
ggtggactcagactgcttaacaccttaatttcagaggttagggataccttgtttggccgt
gttaccgagcgtgctatcagaaggctggggcttaatgtttttgagcatcttcaccgtctg
gatttagaatttcatctggagcgaagaaccggaggtttgtcccgggatatagaaagaggt
accagcggcattaatttcctgatgcgtttcatggtgtttaatatcgtcccaacaatttta
gaaattgccctcgtggtcggtatcttcttttataattacgggatcgaatttgcggcaatc
accttaggagctgtcttggcctatgggctgttttctgtactcgcaacagaatggcgtacc
gagtatgtgcgagaagcagcaaaggcagattcacattccaatacccgagccatagatagc
ctgctgaattatgaaacggtgaagtattttaataatgaagcttatgaggcgagacgctac
gatgaagcgttagaagagtgggagcaagcaaagcggaaaaaccgtctgtcactgttcgcc
ctcaatgcggggcaagcgctaattatttcggtggcaatgactttgatgttgggacttgcc
gcccaaaacgtggcccaaggcacgatgaccataggtgatttcgtgctggttaatgccttt
atgatgcagctttttatcccactcaatttcttgggtttcgtgtaccgggaaattcgcggc
gctttagctaatatagaaagaatgttcggcctattaaagcgggtgcctcttattcaagat
aaagacaatgccaaagaggtctgccagggctctggagagttgaagtttgagtctgttagc
tttagctataatacgcgtcagattctgaaagatgtgagttttaccatcttgcccggtcag
aaagtggctattgtcggagatagcggtgccggcaagtctactatcgttaaattgcttttt
cgtttctatgatgtagagaaaggttgtattagcttagatggcgttaatattaataatttg
actcaagatgcacttcgtcaagctattgccatcgttccccaagataccgtgctgttcaat
gactcattattagagaatattcgctatggtcgtcccaatgccagcgacgaggagatcttt
caggccataaacatggcgcatctctctcacttcattgaggccttacccgaaggttggaat
actcctgtgggggaaaggggattgaagttatcaggtggtgagaaacagcgagtcgctatc
gctagggcgattctaaagggatcacctctcttggtgttcgatgaggcgacatcttcattg
gatagccaatcagagcaggccatattaaatgcactgaaagaggtggccaaggggcacaca
agtttagtgattgcccatagactctccaccgttgtcgatgcagatcaaattctggtgctg
agccaagggcaaatcgttgaaaccggtgatcatgagtcacttttaggccaaaatggccta
tattccagattatggaacattcaaaactaa
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