Shewanella psychrophila: Sps_04588
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Entry
Sps_04588 CDS
T05063
Name
(GenBank) putative permease
KO
K07091
lipopolysaccharide export system permease protein
Organism
spsw
Shewanella psychrophila
Pathway
spsw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sps_04588
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_04588
Transporters [BR:
spsw02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Sps_04588
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AQS39673
UniProt:
A0A1S6HVT9
LinkDB
All DBs
Position
complement(5204793..5205905)
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AA seq
370 aa
AA seq
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MIVFRYLIREVLKAQIAVLLVLLAIFISQHFVRVLADASDGEFPASLVLTLLGLNLPYLA
VLVIPLSLFLGILMAHGRMYADSEMVILHGVGVSEWYITRVTLLLAVGNMIFTSMLSVYV
TPWAEEKQNQVLEHAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRNNELDKVFVAQLPD
PDDESGISNIVVAEGGKVIEDETGSQRLQLSDGVQYQATPKQVDFQIIEFGSYQMQIKEQ
AVDERRRKLSAMPINELMDLEGPAATAEFHWRLAIPLAIPLMTLIAVPMARVNVRQGKFA
KMFPAILLYLGYFGLMIAGRKALEDGVIPEYLGMWWIHASALFLGILLLGKERPSGAKLS
GIFKRKRADA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtatttagatatttgattcgagaagttttaaaggcacaaatagccgttctttta
gtacttttagctatttttataagccaacattttgttcgtgtactcgcagatgcatctgat
ggagaatttccagcttcgttagtcttgaccctattaggtcttaatttaccttatctggct
gttctggttataccgttgagtttattcctcggtattttaatggctcatggccgaatgtat
gccgacagtgagatggttattcttcacggtgtaggggtgagcgagtggtatatcactcga
gtgaccctattattggccgtgggtaatatgatttttaccagtatgttgtcggtttatgtt
acgccttgggccgaagagaagcagaaccaggtgctcgagcatgctcagtctgaagcgggg
ctggctgctattactcagggacgttttcagaccagtcccaatggtagagccgtgctattt
gtcgaacgaattggccgaaataatgagctagacaaggtgttcgtagcacaactacctgat
ccggatgatgaatctggtatcagtaatattgtggttgccgaaggtggtaaggtcatcgag
gacgaaaccggaagccagagactgcaattaagtgacggtgtgcaataccaggcgacgcct
aaacaagtcgattttcagatcatcgaatttggtagctatcagatgcaaatcaaggagcaa
gcggtcgatgaacgccgccgtaagctctctgccatgcctatcaatgagctgatggatcta
gagggacccgctgcaacggctgaattccattggcgactggccattcccttagctattcct
ttaatgaccctcattgccgtaccaatggccagagttaatgtacgccaaggaaaattcgcc
aagatgttcccggcgatactactctatctggggtattttggtctgatgattgccggacgt
aaagcgttagaagatggtgtgatacctgagtatctgggtatgtggtggatacatgcatcc
gccctcttcttaggcatattactcttaggtaaagagcgtccttccggtgctaaactgagc
gggatatttaagcgtaagagggctgatgcgtga
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