KEGG   Shewanella psychrophila: Sps_04679
Entry
Sps_04679         CDS       T05063                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
spsw  Shewanella psychrophila
Pathway
spsw02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Sps_04679
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spsw02044]
    Sps_04679
Enzymes [BR:spsw01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Sps_04679
Secretion system [BR:spsw02044]
 Type IV secretion system
  Trb secretion system protein
   Sps_04679
SSDB
Motif
Pfam: T2SSE nSTAND3 ResIII FtsK_SpoIIIE Zeta_toxin AAA_19 TrwB_AAD_bind DUF87 PhoH DEAD AAA_7 AAA_29 Pox_A32 P-loop_TraG Sigma54_activat AAA_22 Mg_chelatase AAA_16 AAA_23 ATPase AAA_30 RNA_helicase TsaE ABC_tran Septin SWI2_SNF2 GTP_EFTU PduV-EutP cobW DO-GTPase1 IstB_IS21 NACHT ORC-CDC6-like AAA_28 SRP54 ATP_bind_1 Sigma54_activ_2 CLP1_P RsgA_GTPase KTI12 AAA ABC_ATPase CbiA NPHP3_N nSTAND_NTPase5 DUF6079_1st UvrD-helicase AAA_33 AAA_18 KAP_NTPase Dynamin_N IIGP MMR_HSR1 AAA_10 AAA_14 AAA_11 G-alpha
Other DBs
NCBI-ProteinID: AQS39762
UniProt: A0A1S6HWA9
LinkDB
Position
5297663..5298589
AA seq 308 aa
MIDSRISSLIAHIGPAIMSKLDDPNVMEILLNPDGNLWVEEFGQPMTLFGTLSSVKSNLV
LKSIAGFHDTVVNADHPILECELPIDGSRFEGIIPPVTAAPTFTIRKKAVKVFTLHEYIG
SGTLTQAQYECLIKAIASHKNILIVGGTGSGKTTFANALIDAMVKHDENDRIIIIEDTNE
IQCSAPNFVALRANTNTTMNQLLRATLRLRPDRILIGEVRGGEALALLKAWNTGHPGGIA
TIHADSAVMGLSRLEDCISEATATINKTLIANAINVIVFIKKTREGRRIEEIIEVTGFEA
GQYHTQSA
NT seq 927 nt   +upstreamnt  +downstreamnt
atgattgactcacgcatatcaagtctcatcgctcatattggccccgctattatgagtaaa
ctcgatgaccctaacgtcatggagatactgctcaacccggacggcaatttatgggtagag
gaatttggccaacccatgacactatttggcactctgtcatcagtaaaatcgaacttggta
ctcaagtcgattgcagggtttcacgacactgtagtgaatgcagaccatcctatactcgaa
tgtgaactcccaatagatggcagtcgatttgagggcattatcccaccggtgactgccgca
cctacatttaccatccgtaaaaaagccgtcaaggttttcaccctgcatgagtatataggc
agcggaacactgacacaggctcaatatgagtgcctgataaaagccattgcttcacataaa
aacattttgattgtgggcggcaccggctctggtaaaaccaccttcgctaacgccctgatt
gacgccatggtcaaacatgatgaaaacgaccgcatcatcattattgaagatactaatgaa
attcagtgcagtgcgccaaatttcgtcgcgctgcgagccaacacgaataccacgatgaac
cagttgcttcgtgcaacgctccgattacgaccagaccgtattttgattggtgaagttcga
ggtggtgaagcgttagcattacttaaggcatggaacactggccaccctggtggcatagcg
acgattcacgctgacagtgccgtcatgggattatctcgcctggaggactgtatcagcgaa
gcgactgccaccatcaacaaaaccctcatcgccaatgccatcaacgtgattgtcttcatc
aaaaagacccgtgaagggcgccgcatagaagaaatcattgaagtcacaggctttgaagca
gggcagtaccatacccaatcagcctaa

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