Shewanella psychrophila: Sps_04717
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Entry
Sps_04717 CDS
T05063
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spsw03036
]
Sps_04717
03400 DNA repair and recombination proteins [BR:
spsw03400
]
Sps_04717
Chromosome and associated proteins [BR:
spsw03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Sps_04717
DNA repair and recombination proteins [BR:
spsw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sps_04717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF6074
3HB_CusB
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
AQS39800
UniProt:
A0A1S6HW54
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All DBs
Position
complement(5332091..5332483)
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AA seq
130 aa
AA seq
DB search
MSEFLATLTHGRRFKAAVTDLPVEELKLFQDKLNKLIDDREAQIAADLEINAERNAQIDA
IRKQMAELGLSADDIEAVKAPKKKRDPRPAKYSIEVNGETITWTGQGRMPTVFKKELDDG
FEMNDFLIKP
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatttttagcgacactcactcatggccgcagatttaaagcggcagtaacagac
cttccagttgaagaacttaaattgttccaggataagctcaacaagcttatcgatgaccgc
gaagcacaaatagcagccgacttagagataaacgctgagcgaaacgcacaaattgatgct
atccgtaaacagatggcagagcttggattaagtgcagatgatattgaagcggtcaaagca
ccaaagaagaaacgcgaccctcgcccagcgaaatacagcattgaagtgaatggcgaaacc
atcacctggacaggccaaggccgcatgcctacagtgtttaaaaaagaactcgatgatggc
ttcgagatgaacgatttcctaatcaagccatag
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