KEGG   Shewanella psychrophila: Sps_04830
Entry
Sps_04830         CDS       T05063                                 
Name
(GenBank) Type II/IV secretion system protein
  KO
K10965  toxin coregulated pilus biosynthesis protein T
Organism
spsw  Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spsw02044]
    Sps_04830
Secretion system [BR:spsw02044]
 Type II secretion system
  Toxin co-regulated pilus biosynthesis protein
   Sps_04830
SSDB
Motif
Pfam: T2SSE AAA_29 AAA_22 nSTAND3 AAA_19 NPHP3_N NTPase_1 AAA_30 Rad17 AAA_16 AAA_7 Viral_helicase1 Herpes_Helicase ATPase DUF87 FtsK_SpoIIIE AAA_23 MeaB nSTAND_NTPase5 SRP54 AAA_14 cobW ABC_ATPase NB-ARC G-alpha SLFN-g3_helicase FMN_red
Other DBs
NCBI-ProteinID: AQS39912
UniProt: A0A1S6HWQ2
LinkDB
Position
complement(5447322..5448293)
AA seq 323 aa
MPIFGSSGGCYHAVLRIIKAESEIFDIVENKNPLEMLKLTADEQHDLQAMMQCPHGLLLI
TGVTGSGKSTTIKNVLEWMYNKKYGSNACFVTVEDPVEYRIMGAIQSSVVRLKEGVNPFL
PALKSAMRRDPDVLMIGETRDDQTATALTGAIESGHYAVTTVHAGSVTTAIQRLESLGVK
KDRLASPGFIAGIITQTLVPILCGHCKVYWGTDNFEHRLFTKNIGGCEKCNCSGTAGRRP
VFEMLVPDLNMLQEIAAGNPTKVYKHWRDKHDDKKKLNQGYLMKEKIFILVMKGDVDYQW
FIDFYGAIDETILREIHEKTINR
NT seq 972 nt   +upstreamnt  +downstreamnt
atgccaatatttggtagctcaggtggatgttaccatgctgtattaaggataattaaggcc
gagagtgaaatttttgatattgttgaaaataagaatccgttagaaatgcttaagcttaca
gcagatgaacaacatgatttacaagctatgatgcagtgcccccacggtctcttgttgata
acaggtgtcacaggttcaggtaaatcgaccacgattaaaaacgtgcttgagtggatgtat
aataagaaatatggcagtaatgcctgctttgttaccgttgaagatcctgtggaatatcgg
atcatgggtgctatacaaagctcagttgttcgccttaaagagggggtcaacccttttctg
cctgcacttaaatccgccatgagacgagatccagatgtgctaatgataggtgagactcgt
gatgatcaaactgccacagcgctcactggggcgatcgagagtggacattatgcggtaaca
actgtgcatgcgggctcagtcacaacagcgattcagagactagaaagcttaggggtaaaa
aaagaccgtttagcttcgcctggatttatcgcgggcattatcacccaaacactggttcct
atcctttgtggtcattgtaaagtctattgggggactgataattttgaacatcgactattt
actaagaatattggaggctgtgaaaagtgtaactgttcaggtactgcagggagaagaccg
gtatttgaaatgctggtgccagacctgaacatgttacaggaaatcgcggcgggtaaccca
actaaggtctacaaacattggcgtgacaaacatgacgacaagaagaaattaaatcaaggt
tacctgatgaaagaaaaaatattcattttagttatgaagggggacgtcgattatcagtgg
ttcatcgatttctatggggctatagacgaaactattctaagagagattcatgagaaaact
atcaatcgttga

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