Shewanella psychrophila: Sps_04966
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Entry
Sps_04966 CDS
T05063
Name
(GenBank) outer membrane protein (porin)
KO
K14062
outer membrane protein N
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_04966
Transporters [BR:
spsw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sps_04966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
AQS40044
UniProt:
A0A1S6HX88
LinkDB
All DBs
Position
complement(5605710..5606918)
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AA seq
402 aa
AA seq
DB search
MKKTLLATALSAVIFVPSVAAIEIYKDDKNAVEIGGFIDARVIDTQGATEVVNGASRINF
GFTREMSDGWKAFTKLEWGVNPFGNSEIVYSSESNFESKSGDFLNNRLGYVGIGHDKYGT
LSIGKQWGAWYDVVYNTNYGFVWDGNAAGVYTYNKADGAINGTGRGDKVVQYRNSFGDVS
FALQAQLKHDVFYTCEATQGLSTDCEERWKANEESQEVHYDYTYGGSITYQATDKFTLTA
GLNRGEFEVAFNTGEMITATDLIYGVGATWGGFDNEGFYAAANFNKNENHDTDNLGRLIK
DSYGIESLFSYKFDNGLRPFISYNILDAGSDYVIQPNSADPKDVFKRQFVVAGLHYIWDV
NTVIYVEARKDFSDFTSADKEQEVKMSISEDDGVAVGIRYTL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaactttactagcaacggcgttatctgccgtcatatttgttccgtcagtagcg
gcaatcgaaatctataaagatgacaaaaatgcagtggagattggtggattcattgatgct
cgtgtcattgatactcaaggcgctacggaagttgttaacggggcgtcacggattaacttt
ggcttcactcgtgaaatgagtgatggttggaaagcattcactaagctggaatggggcgtt
aacccatttggtaacagtgagattgtttatagcagtgaaagtaacttcgagtctaagagc
ggagactttttaaataaccgccttggttatgtcggtattggccatgataagtacggtacc
ttaagcataggaaaacagtggggcgcttggtacgacgttgtgtataacactaactatggt
tttgtatgggacggtaacgcggcgggtgtctatacctataataaggccgatggtgcgatc
aatggtactggtcgtggtgataaggtggttcaataccgtaacagcttcggtgatgtgagt
ttcgcactgcaagctcagttaaaacatgatgtcttttatacctgtgaggcaacacaaggc
cttagtaccgattgtgaagaacgttggaaggctaatgaagagtcacaagaggttcattac
gattacacttacggtggctctatcacttatcaggctacagataaattcacgttaaccgca
ggtcttaaccgcggtgagtttgaagtggcttttaatacaggtgaaatgatcactgcaacg
gatcttatttatggtgtcggtgccacctggggaggcttcgataatgagggcttctacgct
gccgctaacttcaacaaaaatgaaaaccacgataccgataacctaggccgtctgattaag
gactcttatggtatcgaatctttgttctcatataagtttgataatggtctgcgtccattt
atctcctataacatcttagatgcgggcagcgattacgtgattcagccaaacagtgcagat
cctaaggatgtatttaagcgtcagttcgttgttgctggcctgcattatatttgggatgtg
aatacagtaatctatgtagaagcgcgtaaagactttagtgactttaccagtgcagacaag
gaacaagaggtgaaaatgtctatctcggaagatgatggtgtagccgtaggtatcagatac
acgctctaa
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