Shewanella psychrophila: Sps_05025
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Entry
Sps_05025 CDS
T05063
Name
(GenBank) cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
spsw
Shewanella psychrophila
Pathway
spsw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sps_05025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_05025
Transporters [BR:
spsw02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Sps_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
AAA_7
RsgA_GTPase
AAA
Mg_chelatase
nSTAND1
NACHT
AAA_23
T2SSE
cobW
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AQS40103
UniProt:
A0A1S6HX28
LinkDB
All DBs
Position
complement(5680999..5682804)
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AA seq
601 aa
AA seq
DB search
MDKSLEKQLISWLRQQKKACGFYLNLTVLFGLLTGFSLVVQAYLLSTILHGIIILDLPKS
DFVHEFILLLGLIPLRAILAFARERASFESGKRLRLQIRSAVLDKLTELGPAFVKGKPAG
SWASIVLEQVEDLHDFYARYLPQIILAGFIPLTILVVVFPLNWAAGIILLATAPLIPMFM
ILVGMGAADANRKNFSALAKLSGHFMDRLKGLNTLKLFNRGEAEAKEIESASEEFRERTM
SVLKMAFLSSAVLEFFAAVSIAVLAVYFGFSYLGHLNFGDYDHGISLFIGLFVLMLAPEF
YQPLRDMGTHYHAKAQAIGAAEELMALLEYRLESDVSEKKAGGIELDWHSGAEIIATDLA
VMSHDGSRLVGPLSFHLKFGEHVALVGPSGSGKTCLLNAILGFLPYQGSLQINGNELKDL
DKAHYRRHLAWLGQDPQLFHGSIRSNVAMVNPDMGDAEVEALLAKAKVLDFVQEQALGLG
YPIGEQMAGVSVGQAQRIALARALGQEAKLFLLDEPTASLDSHSEQAVLSALREAMSQSS
CLMVSHRLEQLDGMDTILVLDKGDIVQRGSFDELNRVEGLFRQMQDDECELDTCMDKESH
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatcgttagagaaacaattgatttcttggttaaggcagcaaaaaaaggcctgt
ggtttctatctcaatttaaccgttttatttggcttactaaccggattttctctggtcgta
caggcatacctactctcgacgatactccatggcatcattattctagacttgcccaaatct
gacttcgtccatgaatttatattgttgctgggattaattcccctgcgagcaatattggca
tttgctcgtgagcgcgccagttttgaatcggggaagcgtcttagattgcagatccgcagt
gcggtgctcgataaacttaccgaactgggtccagcttttgtgaagggaaaacccgcagga
agctgggcaagtatcgtacttgaacaagtcgaagacctgcatgatttttatgcccgttac
ctaccgcagatcattctggcaggctttataccgctaacaattctggtggttgtcttcccg
ttaaactgggccgcaggcattattttattagctacggcgccacttattcctatgtttatg
atcttagtgggcatgggggctgccgatgcaaatcggaaaaacttcagcgctctagctaag
cttagtggccactttatggatagattaaagggccttaataccttaaagctgtttaatcgc
ggcgaagccgaagcgaaagagattgaatctgcctcggaagagtttcgtgaaagaaccatg
tcagtactgaaaatggcatttttaagctctgcggtattggagttttttgctgccgtgtct
atcgcggttctggcggtctattttggtttcagttatctgggtcatcttaattttggagac
tacgatcatggcattagcctgtttatcggcctgtttgtgctgatgctggctccagaattt
taccagccattacgcgatatgggcacacattaccatgcaaaagcacaagccataggagcg
gccgaagagttgatggccctgttagaatataggcttgagtcagatgtcagtgaaaaaaag
gctggtggcattgaattggactggcacagcggagccgagattatcgccacggatttagcc
gtgatgagtcatgatggtagtcgattagtgggcccattgagctttcacctcaaattcggt
gaacatgtggcgctcgttgggccaagtggctcaggtaaaacctgtctactcaacgccata
cttggctttttgccttatcagggctcacttcagattaacggaaatgagttaaaagatctg
gataaagctcattatcgaaggcatcttgcttggcttggacaagaccctcagctttttcat
ggctcgattagaagcaatgtggccatggttaatcctgatatgggggacgccgaggttgag
gcattattggctaaagctaaggtgttggatttcgttcaggagcaagccttaggcttaggg
tatccaattggagagcagatggcaggtgtctctgttggtcaggctcagcgcatcgcgtta
gccagggccttaggacaagaggctaagttgtttctgttagatgaacctacagcaagctta
gacagtcatagtgagcaggcggtactcagtgcactgcgtgaagcaatgtcacaatcctca
tgtttgatggtgagccatagacttgaacagctcgatgggatggatactattctagtgctg
gataaaggcgatatcgttcagagaggaagttttgatgaactgaatcgagtagaagggcta
tttagacagatgcaagatgatgagtgcgaactggatacctgtatggataaggagtcacac
tcatga
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