Shewanella psychrophila: Sps_05165
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Entry
Sps_05165 CDS
T05063
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00270
Cysteine and methionine metabolism
spsw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Sps_05165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_05165
03032 DNA replication proteins [BR:
spsw03032
]
Sps_05165
03036 Chromosome and associated proteins [BR:
spsw03036
]
Sps_05165
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
spsw02048
]
Sps_05165
Enzymes [BR:
spsw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Sps_05165
Transcription factors [BR:
spsw03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Sps_05165
DNA replication proteins [BR:
spsw03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Sps_05165
Chromosome and associated proteins [BR:
spsw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Sps_05165
Prokaryotic defense system [BR:
spsw02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Sps_05165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AQS40234
UniProt:
A0A1S6HXS6
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All DBs
Position
5812032..5813702
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AA seq
556 aa
AA seq
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MRGIIVDNFAGGGGASEGISWALRRSIDIAINHDQDAIAMHSANHPDTLHYCESVFDVDP
VQATAGKPVDLAWFSPDCKHFSKAKGSKPVSKQIRGLAWIVIRWALLTRPKVIMLENVEE
FKTWGPVVAKEVTKFDVDGTPYTETEQSPCPDRKTETFKAFVDILSSGIEADHPALAECV
EVLGLTEVTLLIKGLNYKVEWREMRACDFGAPTIRKRLFMIARCDGQPIQWPEPTHGKPN
SLDVLSGKFLPWRTAAECIDWSIPCKSIFGRKKPLAEKTMHRIARGIHKFVIDAEQPFIA
PVEAMITPFITEHANASGQRNMAVNEPLRTICAQVKGGHFAVVTPTIIRQFGNSIGHSIT
EPMGTVTAGGGGKSILTVANLAKHFGGFYTGPGADINHPLPTVTTVDHNALITSSMLKLR
GTNIGFPTSEPAHTITAGGLHLGELRAFLIKYYGNEKDGVACTEPLHTITTGDRFGLIMI
KGEPWQIIDIGMRMLEPHELFACQGFNPDYIIKDYNGRTTKKQQVARVGNSVPPQFAEAL
VRANLPELCSQPAKAA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagagggatcatcgtagacaactttgctggaggtgggggtgcatccgagggcataagc
tgggcattaagacgcagtatcgatattgctataaaccatgatcaagatgctatcgccatg
cactcagccaatcaccctgacaccttgcactattgtgaatcagtatttgacgtagaccct
gtgcaagccacagctggtaagcccgtagatctcgcttggttttcccccgactgtaaacat
ttcagtaaggctaaaggaagcaagccggtaagtaaacagatcagggggcttgcctggata
gtgatccgctgggccttattaactcgtcctaaagtaatcatgctggaaaatgttgaagag
ttcaaaacttgggggccagtagttgccaaagaggtcacaaaatttgatgtagatgggaca
ccttacacggagacagaacagtcaccttgcccagaccgcaagactgaaaccttcaaagcg
tttgtagatatcttatcttccggcatcgaagcagatcacccagcgctagccgagtgtgtt
gaagtgctagggctaaccgaagtaaccctgctaatcaaagggcttaattataaagtcgaa
tggcgcgaaatgcgtgcctgtgactttggagcacctaccattagaaagcgcttattcatg
atagcccgttgtgatggtcagcctatccaatggcctgagccaacccatggaaagcctaat
agtttagatgtgttaagtggaaagttcttaccatggcgaactgctgcagagtgcatcgat
tggtctatcccctgtaagtctatttttggtcgcaaaaaaccactcgccgaaaagactatg
caccgtattgccagaggcattcataaattcgtaattgatgcagaacaaccattcattgct
cctgtagaagcaatgataaccccatttattactgaacatgcaaatgctagcggccaacgt
aatatggccgttaatgaaccattgaggactatttgcgctcaggtaaaaggaggccacttt
gctgttgttacccccactataatccgacagtttggcaatagtatcggacattcaattaca
gaacctatggggacggtgacagctgggggcggtggaaaatcaattcttacagtggctaac
ctagcaaaacacttcggtggtttctatacgggaccaggtgcagacataaatcatccattg
cctactgtcactaccgttgaccataatgcgctaatcactagcagcatgcttaaactgcgc
ggtaccaatataggctttcccacaagcgaaccagctcacaccattactgccgggggcttg
catttaggagagttacgcgcattcctgatcaaatactatggtaacgaaaaagacggtgtt
gcctgcactgagcccttacacacaatcaccactggtgaccgcttcggtctgatcatgata
aaaggtgagccttggcaaataatcgatatcggcatgcgaatgctagaacctcatgaactt
tttgcctgtcagggatttaatcctgattacatcattaaagactacaacggacgcactaca
aaaaaacaacaggtagcccgggtcggaaactctgttccacctcaattcgctgaagcattg
gtacgagccaacttaccagaactttgcagccaaccggctaaagctgcttaa
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