Shewanella psychrophila: Sps_05224
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Entry
Sps_05224 CDS
T05063
Name
(GenBank) fumarase, class II
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00020
Citrate cycle (TCA cycle)
spsw00620
Pyruvate metabolism
spsw00720
Other carbon fixation pathways
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01120
Microbial metabolism in diverse environments
spsw01200
Carbon metabolism
Module
spsw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spsw_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spsw_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sps_05224
00620 Pyruvate metabolism
Sps_05224
09102 Energy metabolism
00720 Other carbon fixation pathways
Sps_05224
Enzymes [BR:
spsw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Sps_05224
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
DUF3461
Motif
Other DBs
NCBI-ProteinID:
AQS40293
UniProt:
A0A1S6HXM8
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All DBs
Position
complement(5870407..5871783)
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AA seq
458 aa
AA seq
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MTTRIEKDSMGELQVPASALYGAQTQRAVNNFPISGKRMPEAFIRALLLAKSAAAQANAK
LALLPQDMADGISDAVSQLLDDKAMMQHFPVDVFQTGSGTSSNMNANEVLATIASKVANQ
TIGANDHVNYGQSSNDIIPSCIHISAAMELENRLLPALEHLLKVIKHKADEVDHHIKTGR
THLMDAMPVRMSQSLLSWASQIEQNIDLIDAIKPRLQSLAQGGTAVGTGINAHEDFAAEF
NRQLSEATNITFTPASNFFSHIGTQDIAVSLSGQLKTTAVSMMKIANDLRWMNSGPLAGL
GEIELQALQPGSSIMPGKVNPVIPEAATMVAAQVIGNDSAITVGGQAGNFELNVMLPMIA
DNLLSSISLLANVSYLLADKAIATFKVNEAQLQKALARNPILVTALNPIIGYAKAAEIAK
KSYKEGRAVLDVAEEETDIPREELEKLLDPAKLTLGGL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactacacgtattgaaaaagacagcatgggagagcttcaggtgcctgcttcggcgcta
tacggcgctcaaacacagcgagcggtgaataactttcccatcagtggcaagagaatgcct
gaggcatttattcgcgccttactgctggccaagtcggctgcggctcaggctaatgctaag
ttagccttgctaccacaagatatggcagatggtatctcagatgctgtgtctcagctactc
gatgataaggccatgatgcagcacttcccggtggatgtgtttcaaactggctcgggtact
agctcgaacatgaacgctaacgaagtattggccactatagcgtctaaagttgccaatcaa
actatcggtgccaacgaccatgtcaattatggtcagagtagtaacgatatcatcccttcc
tgtattcatatcagcgccgccatggagttggaaaatcgtttattaccggcattagaacac
ctgctgaaagtgattaaacataaagcggacgaagtcgatcatcatatcaagaccggccgt
actcatcttatggatgccatgccggtacgtatgagtcagagcttactgagttgggctagc
cagatagagcaaaatattgatttaatcgatgccattaagccgagactacagagcttggct
cagggagggacggcagtcggcactgggattaatgcccatgaagatttcgccgcagagttt
aatcgtcagcttagcgaggcgaccaatatcacgtttacccctgcgagtaattttttcagt
catattggtactcaagacatcgcagtatcattgtcaggtcagctgaaaaccacggccgta
tctatgatgaagatagctaacgacctgcgttggatgaattcgggaccattggcgggtttg
ggagaaattgagctacaagccttacaaccaggttcttctatcatgccgggtaaggttaat
ccggtgatccccgaggcggcaactatggtggcagcacaggttataggtaacgatagcgcc
ataactgtgggcggtcaggcgggtaattttgaattaaatgttatgctgcccatgatcgca
gataatttgttatccagcataagcttactggccaatgtcagttacttattggcggataag
gccatagcgacatttaaggttaacgaggcgcaattgcagaaagccttggcgcgtaatccc
attctggtgaccgcgcttaaccccattattggctatgctaaggctgctgaaatcgccaag
aagtcttataaagaaggtcgagcggtactggatgtggccgaggaagaaaccgacatcccg
cgtgaggagcttgagaagcttctagatccggctaagctcactttaggtgggctttaa
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