Shewanella psychrophila: Sps_05380
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Entry
Sps_05380 CDS
T05063
Name
(GenBank) transcriptional regulator, GntR family
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_05380
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Sps_05380
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
HTH_DeoR
HTH_41
MarR
HTH_11
MarR_2
TrmB
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AQS40449
UniProt:
A0A1S6HY67
LinkDB
All DBs
Position
complement(6054712..6055464)
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AA seq
250 aa
AA seq
DB search
MAYNKINQPKISDVIMGQLEQMILEGSLQPGQKLPPERELALQFEVSRPSLREAIQKLEA
KGLLLRRQGGGTYVKEQLWQSLADPIVELMHSDSESQYDLLEFRHATEGMMAYFAALRGT
DADMQNIKRTIMEVEAAKEIELQAEAIVRFYRAIAEASHNVAMLHLVLSLAPVLHKNVAQ
NLELLNRREEASTRANEHRLALLAAIVRRDPEAAREASNEHLSYIEEVMLTVREEDSRLQ
RSLRRLKSGD
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcttataacaaaataaaccagccaaaaatctctgacgtcatcatgggtcagttagag
cagatgattttggaaggaagcctacaaccaggtcagaaactgcctcctgagcgtgaactg
gcacttcaatttgaagtatcccgtccctcgttacgcgaagccattcaaaaattagaagct
aaaggcttgctgttgcgccgtcaaggcggtggcacctatgtcaaagaacagctttggcaa
agtttggcagaccccatagttgaattgatgcatagtgactctgagagtcagtatgaccta
ctcgaatttcgtcatgccaccgaaggcatgatggcatattttgccgcgcttcgtggtacc
gatgccgatatgcagaatatcaagcgcaccatcatggaagtggaagcggcgaaagagatc
gagttacaggcggaagccattgtacgtttttatcgtgccatagcagaggcgtcacataac
gtggccatgttgcatctggtactcagtttagctcctgtgttgcataagaacgtggcacag
aacctggaattgctgaatcgaagagaggaagcatccacaagggcaaacgaacataggctg
gcattgctagctgcaatcgttcgccgtgatcccgaagcggcccgtgaagcctcgaatgag
catttgagctacatcgaggaagtgatgctgaccgttagggaagaagatagtcggttgcag
cgcagtctgcgccgtttaaaaagtggtgattag
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