Shewanella psychrophila: Sps_05412
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Entry
Sps_05412 CDS
T05063
Name
(GenBank) type IV pilus secretin PilQ/competence protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spsw02044
]
Sps_05412
02035 Bacterial motility proteins [BR:
spsw02035
]
Sps_05412
Secretion system [BR:
spsw02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Sps_05412
Bacterial motility proteins [BR:
spsw02035
]
Pilus system
Pilus assembly proteins
Sps_05412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Phage-tail_1
Motif
Other DBs
NCBI-ProteinID:
AQS40480
UniProt:
A0A1S6HY37
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All DBs
Position
complement(6085371..6087416)
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AA seq
681 aa
AA seq
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MESSAAIKNVFNKSSLFRALSAFVLIVSSSCAAAENRLMDVKFHSVVDHQLELQLIFEHE
VMAPEIDLNASPAQIILGFSDSISALEKEVMPINTVGIENITVRQVDGKMRVMVALNKVK
AYKGKLQGNTYNLTINDEVADRNATTKNPFINGIKNIDFRRTSEGGGELLVKLNNSSVAA
NVKQVGSKLELQLYNTDISSDLLYVMDVQDFATPVRSFETFKEELTTRILIDVSGQYEYN
YKQEGSVFRLSVKKAEKLAVIKEEKKYDGRSLSLNFQSISVRTVLQIIADYNDFNLVTSD
TVEGDITLRLDDVPWDQALDLILQTKGLDKRIEGNILMIAPSEELAIRESQQLKNQLEVK
ELAPLYTEYLQINYAKASDIAELLKGEDSSLLTLRGSASVDERTNTLLVKDTEETLENVH
RLIEVLDIPIRQVLIEARMVTVKDNVSEDLGIQWGITDQQGDRGTSGSLEGAQSIANGII
PALADRLNVALPAPAGAASIAFHVAKLADGTILDMELSALEQENKGEIIASPRITTSNQK
AAYIEQGVQIPYVEASSSGASTVQFKKAVLSLRVTPQITPDNRVILDLEITQDSKGEVVA
TALGEAVSIDTQRIGTQVLVDHGETIVLGGIYQQNLISRVSKVPVLGDIPFVGFLFRSTS
DSNERQELLIFVTPKIISEDL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttctgccgcgataaaaaacgtttttaataaatcttctctttttagagctctt
agtgcttttgtattaattgttagttcctcatgcgctgcggccgaaaaccgcctgatggat
gttaaattccactcagttgtcgatcatcaattagaattgcaattaatcttcgaacatgaa
gtgatggcgcctgaaatcgatctcaatgcatcaccggctcaaataatcttaggttttagt
gacagtatctctgccttagagaaagaggtcatgccaataaatactgttggaattgagaat
atcactgtgcgccaagttgatggcaagatgagggtgatggttgcgctgaataaggtcaaa
gcttataagggtaaactccaaggtaatacctataatctgacgataaatgatgaagttgcc
gatcgtaatgcgacgacaaaaaatccatttattaacgggattaaaaatattgattttaga
cgcacttctgaaggtggtggagagttattggttaagctcaacaatagctcggtggcggca
aacgtgaagcaggttggctctaagctagaattacagctttataataccgacataagttca
gatctcttgtatgtgatggatgttcaagactttgcaactccggtgcgtagcttcgaaacc
ttcaaagaagaactaactacgcgaatacttatcgatgtctcaggccaatatgaatataac
tataaacaggaaggcagtgtgtttcgcctcagcgttaagaaggctgagaagctagcggta
ataaaagaagagaaaaagtatgatggacgttcactctctttaaacttccaaagtatctcg
gtgagaactgtattacagatcatcgcagattataacgattttaacttagtcaccagtgat
accgtcgaaggtgatattaccctgcgtctggatgatgtcccctgggatcaggctctggat
cttatcctacaaacaaaaggactggataagcgcatcgaaggtaatattcttatgatagcg
ccaagtgaagaactagcgattcgtgagagccagcagctaaaaaatcagttggaagtgaaa
gaacttgcacctctatatacggaatatttgcagataaattatgcaaaagcatctgatatc
gctgaattattgaagggtgaagattcgagtttgctgacgttacggggaagtgcatcagtt
gatgagcgtaccaataccttattagtaaaagataccgaagagaccttagagaatgtacac
aggctaattgaggtactggatattcctattcgtcaggtactcatcgaagctcgaatggtg
acagtgaaagataatgtctctgaagatttgggtattcagtggggtataacggatcagcaa
ggtgacagaggtacttcgggaagtttggagggggcgcagagtattgccaatggaattatt
ccagctcttgctgacagactgaacgtcgccttaccggcaccagccggagctgcaagtatt
gcatttcatgtcgccaagcttgcagatggtaccattcttgatatggagttgagtgccttg
gagcaagagaataagggggaaatcatcgctagcccgcgtatcaccacttcgaatcagaag
gcggcatacatagagcaaggtgttcaaattccttatgttgaagcaagttcgagtggtgcc
tcaaccgtgcaatttaaaaaggccgtattgtctttacgagtaacaccgcaaatcaccccg
gataatcgggtaatattggatttagagataactcaggattcaaaaggtgaggttgttgct
acagcattaggtgaagcggtttcaattgacactcaacgcattggaacccaggtgctggtg
gaccatggtgagacaattgtcttaggtggtatatatcaacagaatttgatcagtcgcgtg
agtaaggtgccagtacttggtgatattccttttgtaggcttcctgttcagaagtacttca
gactctaatgagaggcaagagcttttaatttttgtcacgccaaaaataatctctgaagat
ctataa
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