Shewanella psychrophila: Sps_05440
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Entry
Sps_05440 CDS
T05063
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsw03016
]
Sps_05440
Enzymes [BR:
spsw01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
Sps_05440
Transfer RNA biogenesis [BR:
spsw03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sps_05440
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Gene cluster
GFIT
Motif
Pfam:
Rhodanese
Dna2
DUF3088
KAP_NTPase
DUF1378
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AQS40504
UniProt:
A0A1S6HYI6
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All DBs
Position
6118173..6119282
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AA seq
369 aa
AA seq
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MSQHLVPKSAYKEIMLSGHPMMDVRAPLEFNKGAFPASTSLPLMQDSERQKVGTCYKKNG
QEAAIKLGHTLVKGKIKQQRVDAWLEYFDKNPNAYLYCFRGGLRSQLTQQWLKDAGLEIP
YVEGGYKAMRQYLIDVIDEAPQQQPVFILSGITGSGKTDFLVKRSESVDLEGIAHHRGSS
FGRYHEPQPTQINFESRLAVELLRHQQRAERCLVLEDESFLIGRSAIPKTFYSAMQTAQI
LVLDESNEDRHARLLDEYVHKMHSGYIDRLGEEDGFVAFSEYLSQSITGIKKRLGGQLHD
EFQSIITNALKIQQQTSSTEAHLEWISLLLNKYYDPMYQYQLDKKQARVLFKGSHQAMHE
WLDDYSART
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcatctagtccctaagagcgcttacaaagagatcatgctatcgggtcaccct
atgatggatgtcagagcgccactcgaatttaacaagggtgcattcccagccagtactagc
ctcccgctaatgcaagatagcgaacgacagaaggtaggcacttgctataagaaaaatggc
caagaagcagctatcaagctcggacacactctggttaaaggcaaaataaaacagcaaagg
gtggatgcctggctggagtattttgataaaaacccaaatgcttacctatattgctttcgc
ggcggcctaagatctcagctgactcagcaatggcttaaagatgcaggcttggagatcccc
tatgtagaaggtggttacaaggctatgcgccagtatcttatcgatgtgatcgatgaagct
ccccagcagcaaccagtatttattctcagtgggatcactggcagtggaaaaacggacttc
ttagtcaagcgttccgaatccgtcgatttggagggcattgcccatcatagaggatcgagt
ttcggtcgttaccatgagccccagcctacacagataaattttgaaagccgtttagctgta
gaattattacgacatcagcagagagctgagcgctgcttagtcttagaagatgaaagtttc
cttattggccgctctgcaatacccaagacattttacagcgccatgcaaacggctcagatc
ttagtgctagatgaatcgaatgaagatagacatgctagattattagatgaatacgttcat
aagatgcattccggctacatagaccgattaggtgaagaagatggctttgtcgcgttttct
gagtatttgagccaaagtatcacaggtattaagaagcgactcggtggccagttacatgat
gagttccagtctattattaccaatgcactgaaaattcaacagcaaacaagcagtacagag
gcccacctagaatggatatccctgctactcaacaagtattacgaccccatgtatcagtat
cagctggacaagaaacaagctcgagtcttatttaagggctcccatcaggcaatgcatgaa
tggttagacgactattcggctcgcacataa
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