Shewanella psychrophila: Sps_05555
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Entry
Sps_05555 CDS
T05063
Name
(GenBank) DNA-binding domain-containing protein, AraC-type
KO
K20968
AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_05555
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sps_05555
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ExsA_N
HTH_18
HTH_AraC
TpcC
CTV_P33
DUF3853
Motif
Other DBs
NCBI-ProteinID:
AQS40618
UniProt:
A0A1S6HYU9
LinkDB
All DBs
Position
complement(6236153..6237013)
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AA seq
286 aa
AA seq
DB search
MGNPIELVSQCDLQINTSLVCDCIASGGSEVKTVQDDVLLYVQVGSITIQSADETLTVQA
GEASFIRRGEYLFEYFCETSAEKVETISVFFNTDFLKSFVQRHAETLASFVAVGQQSRVV
AKLSINELVKQTLDGLFSVIEFKLPGILYELKLEELLLLIVHSSSGGDLCRLLRQQTTRS
ADRLHAFMEKHYLKEWKLSEYAREFGASLTTFKELFHEVFGVSPRAWITERRLLYAYNLL
LSSETRIVDIAIEAGFSSQSYFTQSYRRRFGITPSKVRTQLSLSSD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggggaatccaatcgaacttgtttctcaatgtgatttacaaataaatacgagtcttgta
tgtgattgtattgcttctggtggttcagaagttaagacggttcaagacgatgttttactg
tatgtccaagtgggatctatcactattcaatccgcagatgaaaccttgaccgttcaagct
ggtgaagcgagtttcatacgcagaggtgaatatctttttgaatatttttgtgagactagc
gcggaaaaggttgagactatttctgttttttttaatacagattttcttaaatcattcgtt
cagcgtcatgctgaaacgctcgcatcttttgttgccgttggccaacaatcgagagttgtc
gctaagttatcgataaatgagttagtaaagcagactctggatggtctgttttctgtgatc
gaatttaagttgccaggcatcttgtatgagctaaaactcgaggagttgctgttactgatc
gttcattccagttcaggcggtgacttgtgtcgtttgctacggcagcaaacgactcgttct
gcggatcgtctgcatgcatttatggaaaaacattacttgaaagagtggaagttgagtgag
tatgccagagagtttggtgcaagcttgactacgtttaaagagttattccatgaagtcttt
ggggtttcccctcgagcctggatcaccgaacgacgcttgttatatgcctataacctgttg
ttgagcagtgaaacgcgcattgtcgatattgctatcgaagctgggttttccagtcagtct
tattttacgcagagttatcgccgtcgcttcgggatcaccccgagtaaggtgcgtacacag
ctgagtttgtcttcagactaa
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