Shewanella psychrophila: Sps_05600
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Entry
Sps_05600 CDS
T05063
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00300
Lysine biosynthesis
spsw00470
D-Amino acid metabolism
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01120
Microbial metabolism in diverse environments
spsw01230
Biosynthesis of amino acids
Module
spsw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sps_05600
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sps_05600
Enzymes [BR:
spsw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sps_05600
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AQS40663
UniProt:
A0A1S6HYP8
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All DBs
Position
6282510..6283715
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AA seq
401 aa
AA seq
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MDRITQAIDKLTAKQDEHTPLCAYIYDLASLRDHANEIVSALPRNCEFYYAAKANPEERI
LETLAPLVDGFEAASGGELNWLHQCQPKMPLIFGGPGKLISDLSYAIDIDIEAIHVESLL
ELRRIASLCSQKQRSCRILLRMNIGLDGIEHTRLTMGGKPTPFGLDVDALDSAIAIIREQ
PHIELLGFHFHLMSHQLNPQRHLALMKLYFRTFKRWCRDYDLNLSLLNVGGGIGIDYAHP
EQRFDWREFCAELANLIEQESMTKINIRFECGRFVTANAGCYVMQVLDIKQSHGEWFAIG
HGGTHHFRTPAAQSHDHPFFVHSRSPVTAESEPETSPSIKAQNVTLVGQLCTPKDVLARQ
QYIDKLNLGDYLVFTQAGAYAWNISHQNFLMHAAPEMVFLD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggatagaattacccaagcaatcgataaactcacggctaagcaagatgaacatacaccg
ctatgtgcctacatctatgatctcgcctctctacgggatcacgccaatgagatagtctct
gctctaccgagaaactgtgagttttattatgccgctaaggctaatcccgaggaaaggatt
ctggaaactctggcacctctggtagatggtttcgaagccgcctccggcggagagctcaat
tggctgcatcaatgtcagcccaagatgcctcttatcttcggtggtccgggaaaattaatc
agcgacttatcctatgcgatcgatatagatattgaagctattcatgttgagagtttgcta
gagctgcgtcgcatcgccagtttatgctcacagaaacagcgtagttgccgcatcctgcta
cgcatgaatataggtctggacggcatagaacacactcgactaaccatgggcggtaagccc
actccatttggactggatgtcgacgcgcttgactcagccatcgccattatccgcgagcaa
cctcatatagaactactgggatttcattttcatctgatgtcacaccagctaaaccctcag
cgccatctagccttgatgaagctgtacttccgcactttcaagcgctggtgtcgggattac
gatctgaacttgagcctattgaacgtaggcggtggtataggcatagattatgctcatcca
gaacaaaggttcgattggcgcgagttctgcgccgagctggcaaaccttattgagcaagag
tccatgacaaaaatcaacatacgcttcgagtgtgggcgctttgtcaccgccaatgccggt
tgctatgtgatgcaggtcttagacatcaagcagagccacggggaatggttcgccatagga
cacggcggcacccatcacttccgcaccccagcggctcagagccatgatcaccctttcttc
gtgcactcgagatcgccagtaacagctgagtcagagcctgaaacatcgcccagtataaaa
gcgcagaatgttaccctggtaggccaactctgcacgccaaaagatgtgttagccagacag
caatatatcgacaagctgaatttgggggattatctggtatttacccaagccggggcttac
gcctggaacatttcccatcaaaacttcctaatgcatgccgcacctgagatggtgtttctt
gattaa
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