Shewanella psychrophila: Sps_05608
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Entry
Sps_05608 CDS
T05063
Name
(GenBank) AMP-forming long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00061
Fatty acid biosynthesis
spsw00071
Fatty acid degradation
spsw01100
Metabolic pathways
spsw01212
Fatty acid metabolism
spsw02024
Quorum sensing
spsw04146
Peroxisome
Module
spsw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sps_05608
00071 Fatty acid degradation
Sps_05608
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sps_05608
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sps_05608
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spsw01004
]
Sps_05608
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsw04147
]
Sps_05608
Enzymes [BR:
spsw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sps_05608
Lipid biosynthesis proteins [BR:
spsw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sps_05608
Exosome [BR:
spsw04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sps_05608
Exosomal proteins of breast cancer cells
Sps_05608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
PDE12-like_N
Motif
Other DBs
NCBI-ProteinID:
AQS40671
UniProt:
A0A1S6HYT5
LinkDB
All DBs
Position
complement(6288783..6290579)
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AA seq
598 aa
AA seq
DB search
MSLEQYHLTRLIKQQSLQLGEAIALEGFEMAAPWYQVSWSDFDSISTQVAQALIHFGFET
QARVAILAQNSPQWTCADIGCLKTRAVVVPIYPTSTFEQASYIIDDAEAKLIFAGDQAHY
EMACKLTDVCSSLVQVVVFDKSITLQDNDNHHYFDDLIAQSYPAKTLIELDKRLEAANLD
DLLTLIYTSGTTGDPKGVMLDYRNIASMVRQHDNFLPFTPGDVSLAFLPLSHVFERGWSF
YVLSRGGHNVYLQNPMAVKEAIVQVRPHTLCVVPRFLEKVYSAVQDKVSKAPSTRQKLFS
WAMNVGHRQSEVGQGREKASLGLNLQWKLADKLVFSKLKQVLGGRLKFMPVGGAALDPTV
SAFFQSIDVPVLCGYGMTETTATATCNTLANRVPGSNGCVIPEVEIKLGKDNEILVRGDT
VMRGYYNRPQETADTFENGWLKTGDAGRIDEQGNLFITDRIKELMKTSNGKYIAPQRVEG
KVGCCPFIEQVAIVADAKNYVSALIVPAFEALETWAKDKGIHYESPMELLRHSHVIEHFE
QRLKTLQRDLAGFEKIKKFTLLPEAFSMEAGLITPTMKLRRKVIYHKYAREISAMYGR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgagcagtatcatttaacacgattaatcaaacagcagagcctgcaactaggc
gaggctatcgcgctcgaaggattcgaaatggcggccccatggtatcaggtgagctggagt
gatttcgatagcatcagtactcaggttgcccaggccttgattcattttggcttcgagact
caagctcgtgtagctattttggcgcaaaacagtcctcagtggacctgtgccgatattggt
tgtcttaagacacgtgccgttgtcgtaccaatctatccaaccagtaccttcgaacaggca
agttatattatcgatgacgccgaggcgaaacttattttcgctggcgatcaagctcattat
gagatggcctgtaaactgaccgacgtatgtagcagcttggtacaggtggtggtgttcgat
aagagcatcaccctacaagataatgacaaccatcattacttcgacgaccttatcgctcaa
agctatccagctaagacgcttatcgagttggacaaaagactcgaagcggcgaacctggat
gacttgcttaccctgatatatacctcaggtaccacaggcgatccaaaaggcgtgatgtta
gattaccgtaatattgcctctatggtgcgtcagcacgataacttcctaccatttactcca
ggtgacgtgtctttggcctttctgcctctgagtcatgtgttcgagcgaggctggagcttc
tacgtgcttagccgtggcggtcataacgtctacctgcaaaaccctatggcggtaaaagaa
gccatagtccaagtacgcccacacacgctttgtgtggtaccaagatttttagagaaggtg
tacagcgcggtacaggataaagtctctaaggccccgagtacccgtcagaagctgttttcc
tgggctatgaatgtgggtcataggcagtctgaggtgggtcaaggtcgtgagaaagcatca
ttaggtttgaacctgcaatggaaattggccgataaactggtgtttagcaagcttaagcaa
gtattgggcgggcgactcaagtttatgcctgttggtggtgcagcgctggatcctactgtg
agtgctttcttccagagtatcgacgttcctgtgttgtgtggttatggcatgacagaaacg
acggcaacagccacctgtaataccttggctaatcgtgtgcctggatctaatggctgtgta
atacctgaagtcgagatcaaattaggtaaagataacgagattctggtgcgcggtgatact
gtgatgcgcggctattataaccgtccacaagaaaccgctgataccttcgaaaatggctgg
ttaaaaactggcgatgcgggtcgtatcgatgagcaaggcaacctgtttatcaccgaccgt
atcaaagaactgatgaagacttctaacggtaagtatattgcgcctcagcgtgttgaaggt
aaggtgggttgttgtcctttcatcgagcaagttgccatcgtggccgatgctaagaactat
gtttcggctttgattgtacctgcatttgaagctctggaaacttgggctaaagacaagggg
atccattatgaatcaccaatggagctattgcgccatagtcatgtcatcgagcatttcgag
caacgccttaagacattgcagagggatctggctggtttcgagaagattaagaagtttacc
ctactgccggaagccttctctatggaagcgggtctaatcacgccaaccatgaagttgcgc
cgtaaggtgatttatcataaatatgcacgtgagatcagtgctatgtatggcaggtaa
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