Sporosarcina psychrophila: AZE41_01305
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Entry
AZE41_01305 CDS
T04327
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spsy
Sporosarcina psychrophila
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsy03400
]
AZE41_01305
DNA repair and recombination proteins [BR:
spsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AZE41_01305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA_22
AAA_16
NTPase_1
Rad51
RecA
AAA_5
nSTAND3
ATPase_2
AAA_30
GvpD_P-loop
AAA_24
SLFN-g3_helicase
AAA_14
CbiA
ABC_tran
KTI12
NACHT
KdpD
NPHP3_N
MeaB
Fer4_NifH
AAA_31
MCM
DAP3
zf-RING_10
AAA
DUF7129
DZR
HepII_C
AAA_29
APS_kinase
AAA_18
HypA
Motif
Other DBs
NCBI-ProteinID:
AMQ04711
LinkDB
All DBs
Position
300936..302312
Genome browser
AA seq
458 aa
AA seq
DB search
MAKRKSKFMCKSCGYESAKWMGRCPGCGEWNTMEEEVEVAVQKGPRGAFQHTEGVRQKAL
PISSIEMIEEPRIGTDLEEFNRVLGGGIVPGSLILIGGDPGIGKSTLLLQVSSLLANKGQ
RVLYISGEESIRQTKLRAERLGVKSDELYIYAETDLGLIHETIADVKPTFVVVDSIQTVH
HPEVASAPGSVSQVRECTAQLMRIAKTQNIAIFLVGHVTKDGQIAGPRLLEHMVDTVLYF
EGERHHTYRILRSVKNRFGSTNEIAIFEMLQSGLKEVLNPSELFLRERSQGGAGSTVVAS
MEGTRPILVEIQALVTPSSFNYPKRMATGLDQNRVSLLMAVLEKRMGMLLQAQDAYIKVA
GGVKLDEPAIDLAVLMSIVSSYRDLAAGLSDCFIGEVGLTGEVRRVSRIEQRVTEAAKLG
FERAIIPASNIGGWEYPKGIRVIGVETVSDALKIAFKD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagaaaatcgaagtttatgtgtaaatcatgtggttatgaatcggcgaagtgg
atggggcggtgcccaggttgcggagaatggaatacgatggaagaggaagttgaagtagcc
gttcaaaaagggccacgtggtgcatttcagcatacagagggcgtccgtcaaaaggcgctg
cctatcagctcaatcgagatgatagaagaaccaagaattggcacggacttggaggagttc
aaccgcgttttgggtggcggaattgtccccggttcacttattttaatcggtggagatccg
ggtataggaaagtcgacactccttcttcaagtatcttcactgttggcgaacaaagggcaa
cgtgttctttatatttcaggtgaggaatcaattcgacagacaaaactacgtgcagaacga
cttggcgtaaaatcagatgaactttatatttatgcagaaactgatttgggattaattcac
gaaacgatagcggatgtgaaaccgacgtttgtcgttgtggactccatccagaccgtacat
catcccgaagtagcatcagcaccaggaagtgtatctcaagtgcgtgaatgtacagctcag
ctgatgcgcattgctaaaacgcaaaatattgctattttccttgttggccacgtaacgaaa
gacgggcagattgcaggaccgcggttacttgagcatatggtggatacagttctttatttt
gaaggggagcggcatcatacttaccgaattttacgcagtgtgaaaaaccgttttggctct
acgaatgaaattgcgatatttgaaatgttgcagtccggtttgaaagaagtactgaatccg
tccgagctattccttcgagaaagatcccaggggggagcgggttcaacggttgttgcatct
atggaaggaacccggccgattctcgttgaaattcaagcacttgtcacaccatctagtttt
aactatccaaaacgtatggctactgggctcgatcaaaaccgagtgtcattgttaatggct
gtacttgagaaacgtatggggatgctgttgcaggctcaggatgcctatattaaagtggca
ggcggcgtgaagttggatgagccggcaatcgacttggctgtgctaatgagcatcgtttcc
agttatcgtgacttggcggctggtttgtctgactgctttatcggtgaagtcgggctgacg
ggtgaagtacgacgagtatcgagaattgaacaacgtgtgaccgaagccgcaaaactcggg
ttcgagcgtgcgattattcccgcttcaaatattggcggttgggaatatccgaaaggcatt
cgcgtaataggcgtagaaacagtcagtgatgcactgaaaattgcttttaaagattga
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