Sporosarcina psychrophila: AZE41_03325
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Entry
AZE41_03325 CDS
T04327
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spsy
Sporosarcina psychrophila
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsy03009
]
AZE41_03325
Enzymes [BR:
spsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AZE41_03325
Ribosome biogenesis [BR:
spsy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AZE41_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
MTS
PrmA
Cons_hypoth95
Methyltransf_15
Methyltransf_11
N6_Mtase
Methyltransf_12
TRM
PCMT
Methyltransf_23
N6_N4_Mtase
RrnaAD
TPMT
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AMQ05066
LinkDB
All DBs
Position
706099..707460
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AA seq
453 aa
AA seq
DB search
MSYSVNRNDRLSVYVEDLTHDGSGVAKVDGYPLFIPGVLPGEEVDIQVGKTLKKYGFGRL
LNITKASPDRVKPPCHVFSECGGCQMQHLSYEGQLVQKRKTVRDVMDRVAKLPHVPVHPV
KGMDDPWRYRNKSQIPFSERDGKVVSGFYKSRTHHIVDTDICLIQSHEADDLMAMLKYEL
HAIGVDAYDEKTHLGLLRHLIVRKGRTSGEVMVVLVTRKKKFTQKDAAIELIKRVVPNVT
SIMQNFNTERTNVIFGDETVLLYGEPVIVDSIGNIDFEISARSFYQVNPVQTEVLYGQAL
EYAQLTGNESVIDAYCGIGTISLFIAQKAKEVYGVEIVPEAIEDAKRNAELNGINNAHFE
AGPAEVVIPKWYADGKRFDVLVVDPPRKGCDEELLKTILEYKPKRVVYVSCNPGTLARDL
RILEDGGYRTQEVQPVDMFPHSSHVECVAWLEI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatagtgtaaatagaaacgatcgtctcagcgtctacgtagaagatttaacgcac
gatggttcgggcgtagcaaaagtggacggctatccgcttttcatccccggtgtacttcca
ggcgaagaggttgatatacaagtaggtaaaacattgaaaaaatacggctttggcaggctg
ttaaatataacgaaagcatcccctgatcgtgtaaaaccgccttgtcatgtattctcagaa
tgcggtggatgtcagatgcaacacttgtcttacgaaggtcaacttgtgcaaaagcgtaaa
acagtacgtgatgtaatggaccgtgtcgcaaaactcccccatgtgccagtgcacccagta
aaagggatggacgacccttggcgctaccgcaataaatcacaaatccctttcagtgagcgg
gatggaaaagttgtttctggattttataaatcgcgtacacatcacatcgttgacacagat
atctgtctcatccaaagtcatgaagcagatgacctaatggctatgttgaaatatgagcta
catgcaatcggcgttgatgcctatgatgaaaagactcacttaggtttgcttcgtcactta
attgtccggaaaggacgtacctcaggcgaagtaatggttgttttagtaacgcgcaaaaag
aaatttacgcagaaagatgcagccatagaacttattaaacgtgtcgttccaaatgtaacg
tcaattatgcaaaactttaacaccgagagaacgaacgttattttcggtgatgaaacagtt
ttgttatacggggaaccggttattgtcgattcaatcggcaacatcgatttcgaaatatct
gcacgctctttctaccaagtgaaccctgtacagacggaagtcctttacggacaggcacta
gagtacgcacagctaacaggaaatgaatctgtcatcgatgcgtattgcggtattggtaca
atttcgttgttcatcgcacaaaaagcaaaagaagtttatggcgttgaaatcgttcccgaa
gcaatcgaagacgctaaacgcaacgcggaattgaatggcataaataacgcgcatttcgaa
gcaggccctgctgaagtcgtcattccgaaatggtatgcagatggcaaacgattcgacgtg
ctggttgttgatccaccgcgtaaaggctgcgacgaagaacttttgaaaacaattttggag
tataagccaaaacgtgttgtttacgtatcatgtaatccaggtacacttgcacgggattta
cgcatacttgaagatggcggttatcgcacgcaggaagtacagccggttgatatgttccct
cattcgagtcatgtggagtgtgtggcttggttggagatttga
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