Sporosarcina psychrophila: AZE41_04040
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Entry
AZE41_04040 CDS
T04327
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spsy
Sporosarcina psychrophila
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spsy03019
]
AZE41_04040
Messenger RNA biogenesis [BR:
spsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AZE41_04040
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AMQ05174
UniProt:
A0ABV2KDF3
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All DBs
Position
843611..844549
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AA seq
312 aa
AA seq
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MKKIAEYNAGEPFDLFLLIKQSTKGVTTQGKPFMTLILQDKSGDIEAKLWDTTDEHAKTY
AAASIVKVGGEVHEYRGKNQLRIKSIRPVKEDEGVAIADLVPSSATSKEVLYEELMQYFF
EMQNPQIQRITRHLLKKHQTAFMTYPAATRNHHDYVSGLIDHVVSMLKLGKSLADLYPSL
NKDLLYAGIILHDVGKVIELSGPIATQYTIEGNLLGHITIMVNEISKAADELEITGEEVM
LLQHMVLSHHGKEEWGSPKRPMLKEAEILHYIDNIDAKMNMLDRALGKTAPGEFTERIFP
LDNRSFYKPSID
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaattgcagaatataatgcaggcgagccgtttgatcttttcttgctaattaag
caatcaacaaaaggagttaccacacaaggtaaaccgtttatgacgcttattttgcaggat
aaaagtggggatattgaagcgaagttatgggatacaacagatgaacacgcgaaaacatat
gccgcagcatcgattgtcaaagttggcggggaagtacatgaataccgtgggaaaaatcag
ttgcgcattaaaagtatacgtcccgtaaaagaggatgaaggggtggcgattgccgaccta
gttccgtcatcggcaacaagtaaagaagtgctatacgaagagctgatgcagtatttcttt
gaaatgcaaaatccacaaatccaacgaattacgcgtcatttattgaaaaagcatcagaca
gctttcatgacgtaccctgctgcgacaagaaatcaccatgattatgtatcgggtcttatt
gatcatgttgtttccatgctgaaacttggaaaatcgttagcggatctgtatccatcactc
aataaggatttattgtacgcgggaattatcttgcatgatgttgggaaagtaattgaactt
tcaggtccaattgcaactcaatacacgattgaggggaatctgctaggtcatattacgatt
atggtcaatgaaatttcaaaagcggctgacgaacttgaaattacaggtgaagaagttatg
ctgttgcaacatatggttttatctcaccacggtaaggaagaatggggaagcccgaaacgt
ccaatgctgaaagaagcggaaattcttcattacatcgataacattgatgcgaagatgaat
atgttggatcgtgcacttggcaagacggctcctggtgagttcactgaaagaattttcccg
ctggataacaggtcattttataaaccatcaattgactaa
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