KEGG   Sporosarcina psychrophila: AZE41_04090
Entry
AZE41_04090       CDS       T04327                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
spsy  Sporosarcina psychrophila
Pathway
spsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AZE41_04090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spsy03400]
    AZE41_04090
DNA repair and recombination proteins [BR:spsy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AZE41_04090
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AZE41_04090
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_16 TrwB_AAD_bind AAA_7 AAA_19 AAA AAA_22 DUF87 UvrD-helicase AAA_30 Phage_Mu_Gp48 HEM4 UB2H AAA_5 AAA_25
Other DBs
NCBI-ProteinID: AMQ05184
UniProt: A0A127VV50
LinkDB
Position
852556..854538
AA seq 660 aa
MVGKFNLQAPYTPQGDQPSAIAQLLEGHNRGEKHQTLLGATGTGKTFTVSNVLTEINKPT
LVIAHNKTLAGQLYSEFKEFFPDNAVEYFVSFYDYYQPEAYIAHTDTFIEKDSSINDEID
KLRHSATSSLFERNDVLIVASVSCIYGLGSPEEYSAHVVSLRPGMEIGRNELLRRFVDIQ
YERNDVSFTRGTFRVRGDVVELLPASQDEHCLRIEFFGDEIERIREVDSLTGEILGEREH
VAIFPASHFVTGEEKMVKAIENIEIELEERLKEFRAQDKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGAIPYTLLDYFPDDFLIIVDESHVSLPQIRGMYNGDQARKNV
LVDHGFRLPSALDNRPLTFQEFENHVHEAIYVSATPGPYEIEHTPEMIQQIIRPTGLLDP
TIEIRPIEGQIDDLIGQIRERTKNNERVLITTLTKKMSEDLTDYLKEIGIKVQYLHSDIK
TLERIETLRELRIGTYDVLVGINLLREGIDIPEVSLVVILDADKEGFLRSERALIQTMGR
AARNSNGHVILYADRMTDSMAKAIGETERRRDIQRKYNEKHGITPTTIKKEIRDVIRATA
VSEEAISYLEKVTQGKKLTKDEKTKLLVTLEKEMKEAAKALDFERAAELRDTIMELKAER
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggtcggaaaattcaatttgcaagccccttatacaccacaaggcgatcagccgtctgca
atcgcacaactattagaaggacataaccgaggtgagaagcaccaaactttgctcggtgca
accgggactggaaaaacatttaccgtgtcgaatgtcttgacggagattaacaaaccgact
ctcgttatcgctcacaacaaaacgttagcgggtcaattatatagtgaatttaaagagttt
tttcctgataatgcagtcgaatactttgtcagtttctatgattattatcagccagaagcg
tatatcgcgcatactgacaccttcattgaaaaagactcaagcatcaatgatgaaattgat
aaattacgtcactctgcaacatcttccttatttgaaaggaatgatgtactcattgttgca
tctgtctcttgcatttatggtctaggttccccagaagaatacagcgcacatgttgtttct
cttcgtccaggtatggaaatcggacgcaatgaactgcttcgcagatttgtagatattcaa
tacgaacgcaatgacgtaagtttcactcgaggtacgttccgggtacgcggcgatgttgtt
gaacttttgccagcatcccaggatgaacattgcttacgtatcgagtttttcggtgatgaa
atcgaacgaattcgcgaagtggattcactgacaggcgaaatcctcggtgaacgtgaacac
gttgccatattccccgcatctcactttgttactggtgaagaaaaaatggtgaaagcaatt
gaaaacattgaaattgaactggaagaacgtttgaaagagtttcgtgcccaggacaaatta
ttggaagcgcaacgtcttgaacaacggacacgctatgatcttgaaatgatgcgggaaatg
ggcttctgttcgggtattgaaaactattcccgtcatttaacactccgtcctgcaggagcg
ataccgtatacattgcttgactatttcccagatgatttcctcattattgtagatgaaagt
catgtctcattgccacaaatccgtggtatgtataacggtgaccaggcacggaaaaatgtc
cttgttgaccatggtttccgtttgccttcagcactcgacaacagaccgcttacattccaa
gaattcgaaaaccatgtccacgaggcgatttatgtttctgcgacaccaggtccttacgaa
attgagcatactcctgagatgattcaacagattatccgcccgactggtctactagatccg
acaattgaaatacgtccgattgaaggacagattgatgatttgataggtcaaataagagaa
cggactaaaaacaatgaacgtgttctaattacgacgttaacaaagaaaatgtccgaagat
ttgaccgattacttgaaggaaattggtataaaagttcaataccttcattctgacattaaa
acacttgaacgaattgaaacgttaagagaactgcgaataggcacatatgatgtccttgtg
ggtattaacctcttaagagaagggatagacattcctgaagtatcgcttgttgtaatcttg
gatgctgataaagaagggtttctacgttctgagcgagcacttattcagacgatgggtcgt
gctgcccgtaattccaatggacatgtcattttatatgcagatagaatgacggactccatg
gcgaaagcaattggggaaacggagcgacgtcgggacattcaacgaaaatataatgaaaaa
catggcataacacctacgacaatcaaaaaggaaatccgtgatgtgattcgtgcaacagca
gtatcagaagaagctatttcctatttagaaaaagtaacacaaggcaagaagttgacaaaa
gacgaaaaaacaaagctgcttgtaactttggaaaaagagatgaaagaggcagcgaaagca
ctcgacttcgaacgtgctgctgaactaagggatacaatcatggaattgaaggctgaaagg
tag

DBGET integrated database retrieval system