Sporosarcina psychrophila: AZE41_04090
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Entry
AZE41_04090 CDS
T04327
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
spsy
Sporosarcina psychrophila
Pathway
spsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AZE41_04090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsy03400
]
AZE41_04090
DNA repair and recombination proteins [BR:
spsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZE41_04090
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AZE41_04090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_16
TrwB_AAD_bind
AAA_7
AAA_19
AAA
AAA_22
DUF87
UvrD-helicase
AAA_30
Phage_Mu_Gp48
HEM4
UB2H
AAA_5
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMQ05184
UniProt:
A0A127VV50
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All DBs
Position
852556..854538
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AA seq
660 aa
AA seq
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MVGKFNLQAPYTPQGDQPSAIAQLLEGHNRGEKHQTLLGATGTGKTFTVSNVLTEINKPT
LVIAHNKTLAGQLYSEFKEFFPDNAVEYFVSFYDYYQPEAYIAHTDTFIEKDSSINDEID
KLRHSATSSLFERNDVLIVASVSCIYGLGSPEEYSAHVVSLRPGMEIGRNELLRRFVDIQ
YERNDVSFTRGTFRVRGDVVELLPASQDEHCLRIEFFGDEIERIREVDSLTGEILGEREH
VAIFPASHFVTGEEKMVKAIENIEIELEERLKEFRAQDKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGAIPYTLLDYFPDDFLIIVDESHVSLPQIRGMYNGDQARKNV
LVDHGFRLPSALDNRPLTFQEFENHVHEAIYVSATPGPYEIEHTPEMIQQIIRPTGLLDP
TIEIRPIEGQIDDLIGQIRERTKNNERVLITTLTKKMSEDLTDYLKEIGIKVQYLHSDIK
TLERIETLRELRIGTYDVLVGINLLREGIDIPEVSLVVILDADKEGFLRSERALIQTMGR
AARNSNGHVILYADRMTDSMAKAIGETERRRDIQRKYNEKHGITPTTIKKEIRDVIRATA
VSEEAISYLEKVTQGKKLTKDEKTKLLVTLEKEMKEAAKALDFERAAELRDTIMELKAER
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaaaattcaatttgcaagccccttatacaccacaaggcgatcagccgtctgca
atcgcacaactattagaaggacataaccgaggtgagaagcaccaaactttgctcggtgca
accgggactggaaaaacatttaccgtgtcgaatgtcttgacggagattaacaaaccgact
ctcgttatcgctcacaacaaaacgttagcgggtcaattatatagtgaatttaaagagttt
tttcctgataatgcagtcgaatactttgtcagtttctatgattattatcagccagaagcg
tatatcgcgcatactgacaccttcattgaaaaagactcaagcatcaatgatgaaattgat
aaattacgtcactctgcaacatcttccttatttgaaaggaatgatgtactcattgttgca
tctgtctcttgcatttatggtctaggttccccagaagaatacagcgcacatgttgtttct
cttcgtccaggtatggaaatcggacgcaatgaactgcttcgcagatttgtagatattcaa
tacgaacgcaatgacgtaagtttcactcgaggtacgttccgggtacgcggcgatgttgtt
gaacttttgccagcatcccaggatgaacattgcttacgtatcgagtttttcggtgatgaa
atcgaacgaattcgcgaagtggattcactgacaggcgaaatcctcggtgaacgtgaacac
gttgccatattccccgcatctcactttgttactggtgaagaaaaaatggtgaaagcaatt
gaaaacattgaaattgaactggaagaacgtttgaaagagtttcgtgcccaggacaaatta
ttggaagcgcaacgtcttgaacaacggacacgctatgatcttgaaatgatgcgggaaatg
ggcttctgttcgggtattgaaaactattcccgtcatttaacactccgtcctgcaggagcg
ataccgtatacattgcttgactatttcccagatgatttcctcattattgtagatgaaagt
catgtctcattgccacaaatccgtggtatgtataacggtgaccaggcacggaaaaatgtc
cttgttgaccatggtttccgtttgccttcagcactcgacaacagaccgcttacattccaa
gaattcgaaaaccatgtccacgaggcgatttatgtttctgcgacaccaggtccttacgaa
attgagcatactcctgagatgattcaacagattatccgcccgactggtctactagatccg
acaattgaaatacgtccgattgaaggacagattgatgatttgataggtcaaataagagaa
cggactaaaaacaatgaacgtgttctaattacgacgttaacaaagaaaatgtccgaagat
ttgaccgattacttgaaggaaattggtataaaagttcaataccttcattctgacattaaa
acacttgaacgaattgaaacgttaagagaactgcgaataggcacatatgatgtccttgtg
ggtattaacctcttaagagaagggatagacattcctgaagtatcgcttgttgtaatcttg
gatgctgataaagaagggtttctacgttctgagcgagcacttattcagacgatgggtcgt
gctgcccgtaattccaatggacatgtcattttatatgcagatagaatgacggactccatg
gcgaaagcaattggggaaacggagcgacgtcgggacattcaacgaaaatataatgaaaaa
catggcataacacctacgacaatcaaaaaggaaatccgtgatgtgattcgtgcaacagca
gtatcagaagaagctatttcctatttagaaaaagtaacacaaggcaagaagttgacaaaa
gacgaaaaaacaaagctgcttgtaactttggaaaaagagatgaaagaggcagcgaaagca
ctcgacttcgaacgtgctgctgaactaagggatacaatcatggaattgaaggctgaaagg
tag
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