Sporosarcina psychrophila: AZE41_05880
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Entry
AZE41_05880 CDS
T04327
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spsy
Sporosarcina psychrophila
Pathway
spsy03030
DNA replication
spsy03430
Mismatch repair
spsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZE41_05880
03430 Mismatch repair
AZE41_05880
03440 Homologous recombination
AZE41_05880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsy03032
]
AZE41_05880
03400 DNA repair and recombination proteins [BR:
spsy03400
]
AZE41_05880
Enzymes [BR:
spsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZE41_05880
DNA replication proteins [BR:
spsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AZE41_05880
DNA repair and recombination proteins [BR:
spsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AZE41_05880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
SAM_EPH
DUF8117
HemN_C
Motif
Other DBs
NCBI-ProteinID:
AMQ05483
LinkDB
All DBs
Position
complement(1215470..1216135)
Genome browser
AA seq
221 aa
AA seq
DB search
MFWRKQRLNYKLDQSFLLNTKLRDMPFTVFDTETTGFAIAADDGLIEIGAVHVEKSEVTN
RVFQTFVKPLGKIPEYITRLTSIEQYHVENAPTALEAIESYFQFIEDTKSGGWIGHHVSF
DTLVIKKELQRVKYSYEEPTSFDTLDLIDYLNPSWDQLDLKEYAQLFGTPLFERHRALGD
ALTTAHLFVELLKHLEEKGIITLADLLRLKHSNLRLKTARF
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagaaaacaacgattaaattataagttggatcaatcatttttgctgaataca
aagttgcgtgatatgccgtttactgtcttcgatactgaaacgactgggtttgcaattgct
gccgatgacggactcattgaaattggagctgtccatgtcgaaaaatcagaagtaacgaat
cgtgtattccagacctttgtaaagccattaggtaaaatacctgaatatattacgaggtta
acttctattgaacaataccatgtagaaaatgccccaactgcgctcgaagctatagagagc
tactttcagtttattgaggatacgaagagtggagggtggattggacatcatgtaagcttt
gatacgctggtcataaaaaaagaattacagcgtgtgaaatactcctacgaagaacccact
tcttttgatacgcttgatttaatcgattatttaaatccatcttgggaccaactagatctc
aaagagtacgcacagctatttggcacgccactatttgaacgccaccgcgcacttggagat
gcactgacaacagctcatttatttgttgaattattgaagcatcttgaagaaaaaggaatt
ataacgctggcggatttactgcgattgaaacacagtaatcttcgtctaaagacagctcgg
ttttag
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