Sporosarcina psychrophila: AZE41_07230
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Entry
AZE41_07230 CDS
T04327
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
spsy
Sporosarcina psychrophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
CBS
AAA_5
Mg_chelatase
PAS
HTH_50
AAA_3
HTH_30
HTH_29
AAA
PAS_9
AAA_2
PAS_7
GWxTD_dom
Bac_DnaA
HTH_22
PAS_4
HTH_23
AAA_7
HTH_28
HTH_7
AAA_16
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AMQ05723
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Position
1490333..1492105
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AA seq
590 aa
AA seq
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MVKEDYYRVKEWMSEYPQVLTKDLEIGETLRLLSEGHCSELPVVDHERLIGVVTIGDCLA
TIKSGIGWNEPINSIISAVFQSVNEDFSVKQLDGCPTYVVCEKTGMLQGVITQIELLKIN
QALFQRLEKSKETIEWYTLCFDTAYEGLTIVDEAGVIQLFNENYSRYVGVTKEEAIGLPV
ENVIENTRIPIVLRTGIPERNQIHWLQGQKMVVHRMPIWKNGRIIGAVGMLIYEGVSEVQ
QIITQIDLLEQRKGSETSIEVSKVAAQKRFTFEDILGESPAISNTKKLARKAAQSKAPVL
ITGESGVGKEQFARAIHDTGKMSSGRFISVNCAAIPENLIESELFGYMEGAFTGAKKGGK
PGKFELAHMGTIFLDEIGDMPLATQVKILRVIQEKEVERIGGTEPIQVQFRIITATNKNL
EKMVREGEFREDLYYRLHVIPLNIPPLRERKSDIPLIISAQLPTLCQMYDSEGKTIDKEV
MQLFFRYHWPGNVRELINVLERLFALTSESHIKMSDLPNEFFRIEKKQEYMTISSSLSER
NEVRQLVHEEEEKNIIEKVLREVSGNKSEAAKRLGITRATLYNKLSRYQL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagaagattattatagggttaaagaatggatgagcgaatatccgcaagtgttg
acaaaggaccttgaaatcggagaaacattacgtttgctctccgaaggacattgttcggaa
ctgccagttgtggatcatgaacgactaatcggagtcgtcacaataggggattgccttgct
actattaagagtggaataggttggaatgaaccgattaactctattattagtgcagtcttc
caatcggtgaatgaagatttctccgtgaagcaattggatggatgtccaacctatgtcgta
tgtgagaagacaggcatgctccaaggagtaatcacacaaatagaactgctgaagattaat
caagccctttttcaacgacttgaaaaatcaaaggagacaatcgagtggtatacactatgt
tttgatacggcttatgaaggattgacgattgtagatgaagcgggtgtgattcaattgttt
aatgaaaactatagccgctatgttggcgtgactaaggaggaggctattggccttccagta
gaaaatgttattgagaatacaaggataccaattgtccttagaacgggtatccctgagcgt
aatcaaatccattggctgcaggggcaaaaaatggttgttcaccgaatgccgatttggaaa
aatggtcgtattattggggccgtcggtatgcttatttatgaaggcgtttctgaagtccag
caaattatcactcaaatagatttgttagagcaacgaaaagggagtgaaacgtcgattgag
gtgagcaaagttgctgcacagaaacggttcacttttgaagatattctcggagagagtccc
gccatatctaatacaaagaagcttgcaagaaaggcagcacagtctaaggctcccgttttg
atcactggggaaagtggtgttggaaaagagcaatttgcaagggcgatacatgatacgggt
aagatgagcagtggacgttttatcagtgttaattgtgcagcaattcccgagaacttaatc
gaatcagagttatttggctatatggaaggtgcgtttacaggtgcgaaaaaaggagggaaa
cccggaaaatttgagcttgctcacatgggaacaattttcttggatgaaattggtgacatg
ccccttgcgacacaggtgaaaattcttagggtgattcaggaaaaagaggtggaacggatt
ggtggaactgaaccgattcaggtccagttccggattattacagctacaaataaaaatctt
gaaaaaatggtgagggaaggcgagtttagagaagatttatattatcggcttcacgtgatc
cccttgaatattcctccacttagggagcggaaaagcgatatcccactgattatttccgca
cagctacccactctttgtcaaatgtacgatagtgaggggaaaacgattgataaggaagtc
atgcaactattctttcgatatcattggccagggaatgtacgcgagttaattaatgtattg
gaaagattatttgcattgacaagcgaatcccatattaaaatgagtgatttgccaaacgaa
ttttttcgaatagaaaagaaacaagaatatatgactatttcctcgtcgttaagcgaaaga
aatgaagtaagacaacttgtgcatgaggaagaagagaagaatatcattgaaaaagtatta
agagaagtaagcgggaacaagtcggaagcggctaaacgtctcggcattacaagagcaact
ctttataataaactatctcgttatcagttataa
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